airavata-issues mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From "Eroma (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (AIRAVATA-1712) Experiments on BR2 fails during creating scratch directory in gw111
Date Thu, 04 Jun 2015 09:17:38 GMT

     [ https://issues.apache.org/jira/browse/AIRAVATA-1712?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Eroma updated AIRAVATA-1712:
----------------------------
    Summary: Experiments on BR2 fails during creating scratch directory in gw111  (was: Experiments
on BR2 fails during creating scratch directory in w111)

> Experiments on BR2 fails during creating scratch directory in gw111
> -------------------------------------------------------------------
>
>                 Key: AIRAVATA-1712
>                 URL: https://issues.apache.org/jira/browse/AIRAVATA-1712
>             Project: Airavata
>          Issue Type: Bug
>    Affects Versions: 0.16
>         Environment: http://dev.test-drive.airavata.org/portal/pga/public/
>            Reporter: Eroma
>
> Created and launched multiple experiments (Amber_Sander, Echo and AutoDock) on BR2.
> Experiment failed with exp state = FAILED and No job status.
> Error message displayed in PGA
> org.apache.airavata.gsi.ssh.api.SSHApiException: Failed during creating directory :/N/dc2/scratch/cgateway/gta-work-dirs/ECHO_BR21_38839719-5068-4e5d-b1d3-05eaf73efdc4
to remote file bigred2.uits.iu.edu:rFile at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:581)
at org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.makeDirectory(SSHDirectorySetupHandler.java:83)
at org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.invoke(SSHDirectorySetupHandler.java:63)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:844)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:635) at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:437)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:148) at
org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47) at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException:
mkdir: cannot create directory `/N/dc2/scratch': Permission denied at org.apache.airavata.gsi.ssh.util.SSHUtils.makeDirectory(SSHUtils.java:698)
at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:554)
... 10 more org.apache.airavata.gfac.GFacException: Error Invoking Handlers:Error Executing
a InFlow Handler org.apache.airavata.gfac.GFacException: Error launching the Job at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:450)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:148) at
org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47) at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745) Caused by: org.apache.airavata.gfac.GFacException:
Error Invoking Handlers:Error Executing a InFlow Handler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:692)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:437) ...
5 more Caused by: org.apache.airavata.gfac.GFacException: Error Invoking Handlers:Error Executing
a InFlow Handler at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:859)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:635) ... 6
more Caused by: org.apache.airavata.gfac.GFacException: Error Executing a InFlow Handler at
org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:848)
... 7 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException: Failed during creating
directory :/N/dc2/scratch/cgateway/gta-work-dirs/ECHO_BR21_38839719-5068-4e5d-b1d3-05eaf73efdc4
to remote file bigred2.uits.iu.edu:rFile at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:581)
at org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.makeDirectory(SSHDirectorySetupHandler.java:83)
at org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.invoke(SSHDirectorySetupHandler.java:63)
at org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:844)
... 7 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException: mkdir: cannot create
directory `/N/dc2/scratch': Permission denied at org.apache.airavata.gsi.ssh.util.SSHUtils.makeDirectory(SSHUtils.java:698)
at org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:554)
... 10 



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)

Mime
View raw message