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From ey...@apache.org
Subject [5/6] chukwa git commit: Add Apache license header
Date Fri, 26 May 2017 17:16:57 GMT
Add Apache license header


Project: http://git-wip-us.apache.org/repos/asf/chukwa/repo
Commit: http://git-wip-us.apache.org/repos/asf/chukwa/commit/ce5d76b3
Tree: http://git-wip-us.apache.org/repos/asf/chukwa/tree/ce5d76b3
Diff: http://git-wip-us.apache.org/repos/asf/chukwa/diff/ce5d76b3

Branch: refs/heads/master
Commit: ce5d76b37c5f0e4de34529c20e9fa11c684b56f4
Parents: c971524
Author: fangyiwang <fay.y.wang@gmail.com>
Authored: Wed May 24 08:57:55 2017 -0700
Committer: fangyiwang <fay.y.wang@gmail.com>
Committed: Wed May 24 08:57:55 2017 -0700

----------------------------------------------------------------------
 contrib/docker/Dockerfile            |   2 -
 contrib/docker/MetricsCollector.java | 332 ------------------------------
 contrib/docker/README                |   2 +-
 contrib/docker/caffe-testdata.tar.gz | Bin 5946368 -> 0 bytes
 contrib/docker/config-caffe.sh       |  20 +-
 contrib/docker/makeImage.sh          |  17 +-
 contrib/docker/tera.sh               |  16 ++
 contrib/docker/train.sh              |  17 +-
 contrib/docker/train_test.prototxt   |  16 ++
 9 files changed, 81 insertions(+), 341 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/Dockerfile
----------------------------------------------------------------------
diff --git a/contrib/docker/Dockerfile b/contrib/docker/Dockerfile
index 754ff21..639f251 100644
--- a/contrib/docker/Dockerfile
+++ b/contrib/docker/Dockerfile
@@ -50,8 +50,6 @@ RUN mkdir -p /caffe-test/chukwa
 RUN mkdir -p /caffe-test/tera
 
 ADD tera.sh /caffe-test/tera/tera.sh
-ADD MetricsCollector.java /caffe-test/chukwa/MetricsCollector.java
-ADD caffe-testdata.tar.gz /caffe-test/train/data/
 
 ADD makeImage.sh /caffe-test/train/makeImage.sh
 ADD test_solver.prototxt /caffe-test/train/test_solver.prototxt

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/MetricsCollector.java
----------------------------------------------------------------------
diff --git a/contrib/docker/MetricsCollector.java b/contrib/docker/MetricsCollector.java
deleted file mode 100644
index 84f7f40..0000000
--- a/contrib/docker/MetricsCollector.java
+++ /dev/null
@@ -1,332 +0,0 @@
-package chukwa;
-
-import java.awt.BasicStroke;
-import java.awt.Color;
-import java.awt.Graphics2D;
-import java.awt.image.BufferedImage;
-import java.io.BufferedWriter;
-import java.io.File;
-import java.io.FileWriter;
-import java.io.IOException;
-import java.io.PrintWriter;
-import java.util.Iterator;
-import java.util.List;
-import java.util.Set;
-import java.util.Timer;
-import java.util.TimerTask;
-import java.util.Calendar;
-import java.util.*;
-
-import javax.imageio.ImageIO;
-
-import org.json.simple.JSONObject;
-import org.apache.hadoop.chukwa.datastore.ChukwaHBaseStore;
-import org.apache.hadoop.chukwa.hicc.bean.Series;
-
-// http://10.177.68.181:8080/job/Reinstall%20Cluster/api/json
-// curl -X GET -u root:password -i http://10.177.68.181:8080/job/Create%20Cluster/147/parameters/
-
-// hbase(main):011:0> get 'chukwa_meta', "HBaseMetrics"
-
-
-//yum -y install java-1.8.0-openjdk-devel.x86_64
-
-//export CLASSPATH=/opt/apache/hadoop/etc/hadoop:/opt/apache/hbase/conf:/opt/apache/chukwa-0.8.0/share/chukwa/*:/opt/apache/chukwa-0.8.0/share/chukwa/lib/*:$CLASSPATH
-
-//export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/apache/hadoop/bin:/opt/apache/hbase/bin
-//su hdfs -c "hadoop dfs -mkdir -p /user/hdfs"
-//while :
-//do
-//  su hdfs -c "hadoop jar /opt/apache/hadoop-2.7.2/share/hadoop/mapreduce/hadoop-mapreduce-examples-2.7.2.jar
teragen 100 /user/hdfs/terasort-input"
-//  su hdfs -c "hadoop jar /opt/apache/hadoop-2.7.2/share/hadoop/mapreduce/hadoop-mapreduce-examples-2.7.2.jar
terasort /user/hdfs/terasort-input /user/hdfs/terasort-output"
-//  su hdfs -c "hadoop dfs -rmr  -skipTrash /user/hdfs/terasort-input/"
-//  su hdfs -c "hadoop dfs -rmr  -skipTrash /user/hdfs/terasort-output/"
-//done
-
-public class MetricsCollector
-{
-  final static String[] system_metrics = { 
-    "SystemMetrics.LoadAverage.1",
-    "SystemMetrics.cpu.combined", 
-    "SystemMetrics.cpu.sys", 
-    "SystemMetrics.cpu.user",
-    "SystemMetrics.memory.FreePercent", 
-    "SystemMetrics.memory.UsedPercent",
-    "SystemMetrics.disk.ReadBytes", 
-    "SystemMetrics.disk.WriteBytes",
-    "SystemMetrics.network.TxBytes", 
-    "SystemMetrics.network.RxBytes",
-    "SystemMetrics.swap.Total", 
-    "SystemMetrics.swap.Used", 
-    "SystemMetrics.swap.Free"
-  };
-
-  final static String [] hadoop_metrics = {
-    "HadoopMetrics.jvm.JvmMetrics.MemHeapUsedM", 
-    //"HadoopMetrics.jvm.JvmMetrics.MemHeapMaxM",
-    //"HadoopMetrics.dfs.FSNamesystem.CapacityRemainingGB", 
-    //"HadoopMetrics.dfs.FSNamesystem.CapacityTotalGB",
-    //"HadoopMetrics.yarn.ClusterMetrics.NumActiveNMs", 
-    //"HadoopMetrics.yarn.ClusterMetrics.NumLostNMs",
-    //"HadoopMetrics.dfs.FSNamesystem.HAState" ,
-    //"HadoopMetrics.dfs.FSNamesystem.TotalLoad",
-    //"HadoopMetrics.rpc.rpc.RpcProcessingTimeAvgTime",
-    //"HadoopMetrics.dfs.FSNamesystem.StaleDataNodes"
-  };
-  //final static String [] hadoop_processes = {"NameNode", "DataNode", "NodeManager", "ResourceManager"};
-  final static String [] hadoop_processes = {"NodeManager"};
-
-  final static String [] hbase_metrics = {
-    "HBaseMetrics.jvm.JvmMetrics.MemHeapUsedM", 
-    //"HBaseMetrics.jvm.JvmMetrics.MemHeapMaxM"
-  };
-  final static String [] hbase_processes = {"Master", "RegionServer"}; 
-
-  private Timer getMetricSnapshotTimer = null;
-  private String hostname = null;
-  private int intervalInMin;
-  private long intervalInMilli;
-  
-  MetricsCollector (String hostname, int intervalInMin) 
-  {
-    this.hostname = hostname;
-    this.intervalInMin = intervalInMin;
-    this.intervalInMilli = intervalInMin * 60 * 1000;
-  }
-  
-  public void startGetMetricSnapshotTimer (MetricsCollector tester)
-  {
-    getMetricSnapshotTimer = new Timer ("GetMetricSnapshot", true);
-    getMetricSnapshotTimer.schedule (new GetMetricSnapshotTimerTask (tester), 0, intervalInMilli);
-  }
-  
-  public void cancelFetMetricSnapshotTimer ()
-  {
-    if (getMetricSnapshotTimer!= null)
-      getMetricSnapshotTimer.cancel ();
-  }
-   
-  class GetMetricSnapshotTimerTask extends TimerTask
-  {
-    MetricsCollector tester = null;
-    String hostname = null;
-    BufferedWriter bufferedWriter = null;
-    
-    GetMetricSnapshotTimerTask (MetricsCollector tester)
-    {
-      this.tester = tester;
-      hostname = tester.hostname;
-      String outputFileName = "labels.txt";
-
-      try {
-        FileWriter fileWriter = new FileWriter(outputFileName);
-        bufferedWriter = new BufferedWriter(fileWriter);
-      } catch (IOException e) {
-        e.printStackTrace ();
-      }
-
-    }
-    
-    public void run () 
-    {
-      // one hour
-      TimeZone tz = TimeZone.getTimeZone("UTC");
-      Calendar now = Calendar.getInstance(tz);
-      long currTime=now.getTimeInMillis();
-
-      System.out.println ("currTime in UTC: " + currTime);
-      System.out.println ("currTime in current time zone" + System.currentTimeMillis ());
-
-      long startTime = currTime - intervalInMilli;
-      long endTime = currTime;
-      try {
-        System.out.println ("About to run");
-        //tester.getSystemMetrics (hostname, startTime, endTime);
-        //tester.getHbaseMetrics (hostname, startTime, endTime);
-        tester.getHadoopMetrics (hostname, startTime, endTime, bufferedWriter);
-        System.out.println ("Done run");
-      } catch (Exception e) {
-        e.printStackTrace ();
-      }
-    }
-  }
-
-  
-  private void getHadoopMetrics (String hostname, long startTime, long endTime, BufferedWriter
bufferedWriter) throws Exception
-  {
-
-    for (int j = 0; j < hadoop_metrics.length; j++) {
-      System.out.println ("--------------------------------");
-      System.out.println ("metrics: " + hadoop_metrics [j]);
-      for (int i = 0; i < hadoop_processes.length; i++) {
-        String source = hostname + ":" + hadoop_processes [i];
-        System.out.println ("source: " + source);
-        System.out.println ("startTime: " + startTime);
-        System.out.println ("endTime: " + endTime); 
-        Series series = ChukwaHBaseStore.getSeries (hadoop_metrics [j], source, startTime,
endTime);
-        String value = series.toString ();
-        System.out.println ("value: " + value);
-
-        JSONObject jsonObj = (JSONObject) series.toJSONObject ();
-        Set set = jsonObj.keySet ();
-        Iterator iter = set.iterator ();
-        List list = (List) jsonObj.get ("data");
-        if (list == null) 
-          continue;
-        int size = list.size ();
-        System.out.println ("size: " + size);
-
-        if (size > 0 ) {
-          String name = hadoop_metrics [j] + "_" + hadoop_processes [i] + "_" + hostname;
-          drawImage (list, name, startTime, endTime, bufferedWriter);
-        }
-      }
-    }
-  }
-
-  private void getHbaseMetrics (String hostname, long startTime, long endTime, BufferedWriter
bufferedWriter) throws Exception
-  {
-    for (int j = 0; j < hbase_metrics.length; j++) {
-      System.out.println ("--------------------------------");
-      System.out.println ("metrics: " + hbase_metrics [j]);
-      for (int i = 0; i < hbase_processes.length; i++) {
-        String source = hostname + ":" + hbase_processes [i];
-        System.out.println ("source: " + source);
-        System.out.println ("startTime: " + startTime);
-        System.out.println ("endTime: " + endTime); 
-        Series series = ChukwaHBaseStore.getSeries (hbase_metrics [j], source, startTime,
endTime);
-        String value = series.toString ();
-        System.out.println ("value: " + value);
-
-        JSONObject jsonObj = (JSONObject) series.toJSONObject ();
-        Set set = jsonObj.keySet ();
-        Iterator iter = set.iterator ();
-        List list = (List) jsonObj.get ("data");
-        if (list == null) 
-          continue;
-        int size = list.size ();
-        System.out.println ("size: " + size);
-
-        if (size > 0 ) {
-          String name = hbase_metrics [j] + "_" + hbase_processes [i] + "_" + hostname;
-          drawImage (list, name, startTime, endTime, bufferedWriter);
-        }
-      }
-    }
-  }  
-
-  private void getSystemMetrics (String source, long startTime, long endTime, BufferedWriter
bufferedWriter) throws Exception
-  {
-    for (int j = 0; j < system_metrics.length; j++) {
-      System.out.println ("--------------------------------");
-
-      System.out.println ("metrics: " + system_metrics [j]);
-      System.out.println ("source: " + source);
-      System.out.println ("startTime: " + startTime);
-      System.out.println ("endTime: " + endTime); 
-      Series series = ChukwaHBaseStore.getSeries (system_metrics [j], source, startTime,
endTime);
-      String value = series.toString ();
-      System.out.println ("value: " + value);
-
-      JSONObject jsonObj = (JSONObject) series.toJSONObject ();
-      Set set = jsonObj.keySet ();
-      Iterator iter = set.iterator ();
-      List list = (List) jsonObj.get ("data");
-      if (list == null) 
-        continue;
-      int size = list.size ();
-      System.out.println ("size: " + size);
-
-      if (size > 0 ) {
-        String name = system_metrics [j]  + "_" + hostname;
-        drawImage (list, name, startTime, endTime, bufferedWriter);
-      }
-    }
-  }
-
-  public void drawImage (List list, String name, long startTime, long endTime, BufferedWriter
bufferedWriter) throws Exception
-  {
-    String fileName = name + "_" + startTime;
-    PrintWriter writer = new PrintWriter(fileName + ".csv", "UTF-8");
-    int size = list.size ();
-    long startTimeX = (Long) ((List) list.get (0)).get (0) / MyPoint.XSCALE;
-    long endTimeX = (Long) ((List) list.get (size - 1 )).get (0) / MyPoint.XSCALE;
-    int x_size = (int) (endTimeX - startTimeX);
-    int y_size = 1000;
-    System.out.println ("x_size: " + x_size);
-    BufferedImage img = new BufferedImage(x_size, y_size, BufferedImage.TYPE_INT_ARGB);
-
-    Graphics2D ig2 = img.createGraphics();
-    ig2.setBackground(Color.WHITE);
-
-    ig2.setColor (Color.BLUE);
-    ig2.setStroke(new BasicStroke(2));
-
-    MyPoint prevPoint = null;
-    MyPoint currPoint = null;
-    for (int i = 0; i < size; i++) {
-      List point = (List) list.get (i);
-      long time = (Long) point.get (0);
-      double val = (Double) point.get (1);
-      currPoint = new MyPoint (time, val);
-      System.out.println ("time:" + time + ", value:" + val);
-
-      if (prevPoint != null) {
-        int x1 = (int) (prevPoint.time - startTimeX);
-        int x2 = (int) (currPoint.time - startTimeX);
-        
-        int y1 = (int) (y_size - prevPoint.data);
-        int y2 = (int) (y_size - currPoint.data);
-        
-        System.out.println ("point 1: " + x1 + ", " + y1);
-        System.out.println ("point 2: " + x2 + ", " + y2);
-        
-        ig2.drawLine ((int) (prevPoint.time - startTimeX), (int) (y_size - prevPoint.data),
(int) (currPoint.time - startTimeX), (int) (y_size - currPoint.data));
-      }  
-      prevPoint = currPoint;
-      writer.println(currPoint.time + "," + currPoint.data );
-      
-    }
-    String imageFileName = fileName + ".png"; 
-    File f = new File(imageFileName);
-    ImageIO.write(img, "PNG", f);
-    bufferedWriter.write (imageFileName + " 0\n");
-    bufferedWriter.flush ();
-    writer.close();
-  }
-  
-
-  static class MyPoint 
-  {
-    public long time;
-    public double data;
-    static int XSCALE = 1000;
-    static int YSCALE = 100;    
-
-    public MyPoint (long time, double data) {
-      this.time = time/XSCALE;
-      this.data = data;
-    }
-  }
-
-  public static void main (String [] args) throws Exception {
-    String hostname = args [0];
-    String interval = args [1]; // in min
-    int intervalInMin = Integer.parseInt (interval);
-
-    MetricsCollector tester = new MetricsCollector (hostname, intervalInMin);
-    tester.startGetMetricSnapshotTimer (tester);
-   
-    try {
-      Object lock = new Object();
-      synchronized (lock) {
-        while (true) {
-          lock.wait();
-        }
-      }
-    } catch (InterruptedException ex) {
-    }
-  }
-
-
-}

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/README
----------------------------------------------------------------------
diff --git a/contrib/docker/README b/contrib/docker/README
index e090edf..d1ec287 100644
--- a/contrib/docker/README
+++ b/contrib/docker/README
@@ -11,4 +11,4 @@ This file contains instruction on how to build docker image for Chukwa
 
 - Chukwa image can be launched using:
 
-  docker run -itP -p 4080:4080 -p 50070:50070 -p 8088:8088 -p 60010:60010 chukwa/chukwa
+  docker run -itP -p 4080:4080 --privileged -p 50070:50070 -p 8088:8088 -p 60010:60010 chukwa/chukwa

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/caffe-testdata.tar.gz
----------------------------------------------------------------------
diff --git a/contrib/docker/caffe-testdata.tar.gz b/contrib/docker/caffe-testdata.tar.gz
deleted file mode 100644
index 3403719..0000000
Binary files a/contrib/docker/caffe-testdata.tar.gz and /dev/null differ

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/config-caffe.sh
----------------------------------------------------------------------
diff --git a/contrib/docker/config-caffe.sh b/contrib/docker/config-caffe.sh
index 4a98ce7..bf55479 100644
--- a/contrib/docker/config-caffe.sh
+++ b/contrib/docker/config-caffe.sh
@@ -1,3 +1,19 @@
+#!/bin/bash
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
 cd /
 tar zxvf glog-0.3.3.tar.gz
 cd glog-0.3.3
@@ -53,7 +69,3 @@ make build
 #export CORES_PER_WORKER=1
 #export TOTAL_CORES=$((${CORES_PER_WORKER}*${SPARK_WORKER_INSTANCES}))
 #${SPARK_HOME}/sbin/start-slave.sh -c $CORES_PER_WORKER -m 3G ${MASTER_URL}
-
-
-
-

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/makeImage.sh
----------------------------------------------------------------------
diff --git a/contrib/docker/makeImage.sh b/contrib/docker/makeImage.sh
index 1839b26..0164b58 100644
--- a/contrib/docker/makeImage.sh
+++ b/contrib/docker/makeImage.sh
@@ -1,6 +1,21 @@
+#!/bin/bash
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
 GLOG_logtostderr=1 /CaffeOnSpark/caffe-public/.build_release/tools/convert_imageset \
    --resize_height=200 --resize_width=1000 --shuffle --encoded \
    /caffe-test/train/data/ \
    /caffe-test/train/data/labels.txt \
    /caffe-test/train/lmdb
-

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/tera.sh
----------------------------------------------------------------------
diff --git a/contrib/docker/tera.sh b/contrib/docker/tera.sh
index 3d613ba..ac00f7d 100644
--- a/contrib/docker/tera.sh
+++ b/contrib/docker/tera.sh
@@ -1,3 +1,19 @@
+#!/bin/bash
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
 export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/apache/hadoop/bin:/opt/apache/hbase/bin
 su hdfs -c "hadoop dfs -mkdir -p /user/hdfs"
 while :

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/train.sh
----------------------------------------------------------------------
diff --git a/contrib/docker/train.sh b/contrib/docker/train.sh
index a9f3d3b..1993da6 100644
--- a/contrib/docker/train.sh
+++ b/contrib/docker/train.sh
@@ -1,3 +1,19 @@
+#!/bin/bash
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
 export SPARK_HOME=/opt/apache/spark-1.6.0-bin-hadoop2.6
 ${SPARK_HOME}/sbin/start-master.sh
 export MASTER_URL=spark://localhost:7077
@@ -29,4 +45,3 @@ sh ./makeImage.sh
     -connection ethernet \
         -model file:/caffe-test/train/test.model \
         -output file:/caffe-test/train/test_result
-

http://git-wip-us.apache.org/repos/asf/chukwa/blob/ce5d76b3/contrib/docker/train_test.prototxt
----------------------------------------------------------------------
diff --git a/contrib/docker/train_test.prototxt b/contrib/docker/train_test.prototxt
index 34df5d9..485bead 100644
--- a/contrib/docker/train_test.prototxt
+++ b/contrib/docker/train_test.prototxt
@@ -1,3 +1,19 @@
+#!/bin/bash
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
 name: "LeNet"
 layer {
   name: "data"


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