ctakes-commits mailing list archives: December 2012

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build...@apache.org svn commit: r840732 - in /websites/staging/ctakes/trunk/content: ./ ctakes/index.html Tue, 04 Dec, 15:45
build...@apache.org svn commit: r840733 - in /websites/staging/ctakes/trunk/content: ./ ctakes/components.html ctakes/sitemap.html Tue, 04 Dec, 15:54
build...@apache.org svn commit: r840734 - in /websites/staging/ctakes/trunk/content: ./ ctakes/index.html Tue, 04 Dec, 15:55
build...@apache.org svn commit: r840768 - in /websites/staging/ctakes/trunk/content: ./ ctakes/components.html Tue, 04 Dec, 22:11
build...@apache.org svn commit: r840769 - in /websites/staging/ctakes/trunk/content: ./ ctakes/index.html Tue, 04 Dec, 22:12
build...@apache.org svn commit: r844134 - in /websites/staging/ctakes/trunk/content: ./ ctakes/3.0.0/user-guide-3.0.html Fri, 28 Dec, 16:22
build...@apache.org svn commit: r844139 - in /websites/staging/ctakes/trunk/content: ./ ctakes/3.0.0/user-guide-3.0.html Fri, 28 Dec, 16:48
build...@apache.org svn commit: r844143 - in /websites/staging/ctakes/trunk/content: ./ ctakes/3.0.0/user-guide-3.0.html Fri, 28 Dec, 17:01
build...@apache.org svn commit: r844148 - in /websites/staging/ctakes/trunk/content: ./ ctakes/developerguide.html Fri, 28 Dec, 17:40
build...@apache.org svn commit: r844149 - in /websites/staging/ctakes/trunk/content: ./ ctakes/gettingstarted.html Fri, 28 Dec, 17:41
build...@apache.org svn commit: r844150 - in /websites/staging/ctakes/trunk/content: ./ ctakes/userguide.html Fri, 28 Dec, 17:42
chen...@apache.org svn commit: r1417000 - /incubator/ctakes/site/trunk/content/ctakes/index.mdtext Tue, 04 Dec, 15:45
chen...@apache.org svn commit: r1417004 - /incubator/ctakes/site/trunk/content/ctakes/components.mdtext Tue, 04 Dec, 15:54
chen...@apache.org svn commit: r1417005 - /incubator/ctakes/site/trunk/content/ctakes/index.mdtext Tue, 04 Dec, 15:55
chen...@apache.org svn commit: r1417026 - /incubator/ctakes/trunk/ctakes-distribution/src/main/bin/runctakesCPE.sh Tue, 04 Dec, 16:47
chen...@apache.org svn commit: r1417031 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-distribution/src/main/bin/runctakesCPE.sh Tue, 04 Dec, 16:53
chen...@apache.org svn commit: r1417219 - /incubator/ctakes/site/trunk/content/ctakes/components.mdtext Tue, 04 Dec, 22:11
chen...@apache.org svn commit: r1417221 - /incubator/ctakes/site/trunk/content/ctakes/index.mdtext Tue, 04 Dec, 22:12
chen...@apache.org svn commit: r1422988 - /incubator/ctakes/trunk/ctakes-distribution/src/main/assembly/bin.xml Mon, 17 Dec, 15:57
chen...@apache.org svn commit: r1424143 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-drug-ner/src/main/java/org/apache/ctakes/drugner/ae/CopyDrugAnnotator.java Wed, 19 Dec, 21:25
chen...@apache.org svn commit: r1424205 - in /incubator/ctakes/branches/ctakes-3.0.0-incubating: ./ ctakes-assertion/ ctakes-chunker/ ctakes-clinical-pipeline/ ctakes-constituency-parser/ ctakes-context-tokenizer/ ctakes-core/ ctakes-coreference/ ctakes-dependency-parser... Wed, 19 Dec, 23:03
chen...@apache.org svn commit: r1424206 - /incubator/ctakes/tags/ctakes-3.0.0-incubating-rc4/ Wed, 19 Dec, 23:03
chen...@apache.org svn commit: r1424207 - in /incubator/ctakes/branches/ctakes-3.0.0-incubating: ./ ctakes-assertion/ ctakes-chunker/ ctakes-clinical-pipeline/ ctakes-constituency-parser/ ctakes-context-tokenizer/ ctakes-core/ ctakes-coreference/ ctakes-dependency-parser... Wed, 19 Dec, 23:03
chen...@apache.org svn commit: r1426608 - in /incubator/ctakes/trunk/ctakes-smoking-status: desc/analysis_engine/ src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ Fri, 28 Dec, 19:01
c...@apache.org svn commit: r1417934 - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/ ae/feature/ ae/feature/selection/ eval/ Thu, 06 Dec, 15:20
c...@apache.org svn commit: r1422114 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/DocTimeRelAnnotator.java Fri, 14 Dec, 22:01
c...@apache.org svn commit: r1426641 - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/EventAnnotator.java utils/ utils/SMOTEplus.java Fri, 28 Dec, 21:33
dlig...@apache.org svn commit: r1421518 - /incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/eval/RelationExtractorEvaluation.java Thu, 13 Dec, 20:52
james-mas...@apache.org svn commit: r1416621 - /incubator/ctakes/trunk/README Mon, 03 Dec, 18:26
james-mas...@apache.org svn commit: r1416632 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/README Mon, 03 Dec, 18:40
james-mas...@apache.org svn commit: r1421349 - in /incubator/ctakes/branches/ctakes-3.0.0-incubating: ctakes-chunker/desc/ ctakes-chunker/desc/test/ ctakes-context-tokenizer/desc/analysis_engine/ ctakes-core/desc/analysis_engine/ ctakes-core/desc/collection_processing_engine/... Thu, 13 Dec, 15:51
james-mas...@apache.org svn commit: r1424204 - /incubator/ctakes/trunk/ctakes-dictionary-lookup/scripts/java/org/apache/ctakes/dictionary/lookup/tools/CreateLuceneIndexForSnomedLikeSample.java Wed, 19 Dec, 23:01
james-mas...@apache.org svn commit: r1424211 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-dictionary-lookup/scripts/java/org/apache/ctakes/dictionary/lookup/tools/CreateLuceneIndexForSnomedLikeSample.java Wed, 19 Dec, 23:09
james-mas...@apache.org svn commit: r1426567 - /incubator/ctakes/site/trunk/content/ctakes/3.0.0/user-guide-3.0.mdtext Fri, 28 Dec, 16:22
james-mas...@apache.org svn commit: r1426576 - /incubator/ctakes/site/trunk/content/ctakes/3.0.0/user-guide-3.0.mdtext Fri, 28 Dec, 16:48
james-mas...@apache.org svn commit: r844140 - /websites/production/ctakes/content/ Fri, 28 Dec, 16:49
james-mas...@apache.org svn commit: r1426583 - /incubator/ctakes/site/trunk/content/ctakes/3.0.0/user-guide-3.0.mdtext Fri, 28 Dec, 17:01
james-mas...@apache.org svn commit: r844145 - /websites/production/ctakes/content/ Fri, 28 Dec, 17:17
james-mas...@apache.org svn commit: r1426590 - /incubator/ctakes/site/trunk/content/ctakes/developerguide.mdtext Fri, 28 Dec, 17:40
james-mas...@apache.org svn commit: r1426591 - /incubator/ctakes/site/trunk/content/ctakes/gettingstarted.mdtext Fri, 28 Dec, 17:41
james-mas...@apache.org svn commit: r1426592 - /incubator/ctakes/site/trunk/content/ctakes/userguide.mdtext Fri, 28 Dec, 17:42
james-mas...@apache.org svn commit: r844151 - /websites/production/ctakes/content/ Fri, 28 Dec, 17:44
james-mas...@apache.org svn commit: r844189 - /websites/production/ctakes/content/ Sat, 29 Dec, 01:44
mattco...@apache.org svn commit: r1425006 [2/3] - in /incubator/ctakes/trunk/ctakes-assertion-zoner: ./ .settings/ desc/ desc/cpe/ metadata/ src/ src/main/ src/main/java/ src/main/java/org/ src/main/java/org/mitre/ src/main/java/org/mitre/medfacts/ src/main/java/org/mitre/... Fri, 21 Dec, 16:30
mattco...@apache.org svn commit: r1425006 [1/3] - in /incubator/ctakes/trunk/ctakes-assertion-zoner: ./ .settings/ desc/ desc/cpe/ metadata/ src/ src/main/ src/main/java/ src/main/java/org/ src/main/java/org/mitre/ src/main/java/org/mitre/medfacts/ src/main/java/org/mitre/... Fri, 21 Dec, 16:30
mattco...@apache.org svn commit: r1425006 [3/3] - in /incubator/ctakes/trunk/ctakes-assertion-zoner: ./ .settings/ desc/ desc/cpe/ metadata/ src/ src/main/ src/main/java/ src/main/java/org/ src/main/java/org/mitre/ src/main/java/org/mitre/medfacts/ src/main/java/org/mitre/... Fri, 21 Dec, 16:30
mattco...@apache.org svn commit: r1425013 - in /incubator/ctakes/trunk/ctakes-assertion-zoner: pom.xml src/main/java/org/mitre/medfacts/uima/ZoneAnnotator.java Fri, 21 Dec, 16:43
mattco...@apache.org svn commit: r1425014 - /incubator/ctakes/trunk/pom.xml Fri, 21 Dec, 16:43
mattco...@apache.org svn commit: r1425020 - in /incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core: ae/DocumentIdPrinterAnalysisEngine.java cr/XMIReader.java util/CtakesFileNamer.java Fri, 21 Dec, 16:48
mattco...@apache.org svn commit: r1425047 - /incubator/ctakes/trunk/ctakes-assertion/pom.xml Fri, 21 Dec, 17:46
mattco...@apache.org svn commit: r1425059 - in /incubator/ctakes/trunk/ctakes-assertion/src/main/java/org/apache/ctakes/assertion: eval/ medfacts/cleartk/ medfacts/cleartk/extractors/ Fri, 21 Dec, 17:56
mattco...@apache.org svn commit: r1425060 - /incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/cr/XmiCollectionReaderCtakes.java Fri, 21 Dec, 17:58
mattco...@apache.org svn commit: r1425114 - /incubator/ctakes/trunk/ctakes-type-system/src/main/resources/META-INF/org.uimafit/types.txt Fri, 21 Dec, 19:50
spmurph...@apache.org svn commit: r1418056 - in /incubator/ctakes/trunk/ctakes-drug-ner: ./ desc/analysis_engine/ desc/collection_processing_engine/ resources/launch/ src/main/java/org/apache/ctakes/drugner/ae/ src/main/resources/org/apache/ctakes/drugner/lookup/ src/main/r... Thu, 06 Dec, 20:33
spmurph...@apache.org svn commit: r1418059 - in /incubator/ctakes/trunk/ctakes-pad-term-spotter: ./ desc/analysis_engine/ desc/collection_processing_engine/ launch/ Thu, 06 Dec, 20:34
spmurph...@apache.org svn commit: r1418062 - /incubator/ctakes/trunk/ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/data/SmokingStatusLookupConfig.xml Thu, 06 Dec, 20:37
spmurph...@apache.org svn commit: r1418063 - /incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/ Thu, 06 Dec, 20:38
spmurph...@apache.org svn commit: r1418064 - in /incubator/ctakes/trunk/ctakes-smoking-status/launch: UIMA CAS Visual Debugger (Smoking Status).launch UIMA_CPE_GUI--Smokin_Status.launch Thu, 06 Dec, 20:38
spmurph...@apache.org svn commit: r1418066 - /incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine/NonsmokerDictionaryLookupAnnotator.xml Thu, 06 Dec, 20:40
spmurph...@apache.org svn commit: r1421974 - /incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotator.xml Fri, 14 Dec, 16:47
spmurph...@apache.org svn commit: r1421975 - in /incubator/ctakes/trunk/ctakes-drug-ner/src/main/resources/org/apache/ctakes/drugner/lookup: drug_index/ rxnorm_index/ Fri, 14 Dec, 16:49
spmurph...@apache.org svn commit: r1422074 - in /incubator/ctakes/trunk/ctakes-smoking-status: desc/analysis_engine/ desc/collection_processing_engine/ src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ Fri, 14 Dec, 20:47
spmurph...@apache.org svn commit: r1422097 - in /incubator/ctakes/trunk: ctakes-drug-ner/desc/cas_consumer/DrugNERCasConsumer.xml ctakes-pad-term-spotter/desc/cas_consumer/PADOffsetsRecordConsumer.xml ctakes-pad-term-spotter/launch/UIMA_CPE_GUI--PAD_term_spotter.launch Fri, 14 Dec, 21:19
spmurph...@apache.org svn commit: r1423085 - in /incubator/ctakes/trunk/ctakes-smoking-status/desc/analysis_engine: ProductionPostSentenceAggregate_step1.xml ProductionPostSentenceAggregate_step2_libsvm.xml Mon, 17 Dec, 18:34
spmurph...@apache.org svn commit: r1423087 - /incubator/ctakes/trunk/ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ Mon, 17 Dec, 18:35
spmurph...@apache.org svn commit: r1423089 - in /incubator/ctakes/trunk/ctakes-ne-contexts: ./ src/main/resources/ src/main/resources/org/ src/main/resources/org/apache/ src/main/resources/org/apache/ctakes/ src/main/resources/org/apache/ctakes/necontexts/ src/main/resource... Mon, 17 Dec, 18:39
spmurph...@apache.org svn commit: r1423090 - in /incubator/ctakes/trunk/ctakes-core/src/main/resources/org/apache/ctakes/core/analysis_engine: ./ SentenceDetectorAnnotator.xml TokenizerAnnotator.xml Mon, 17 Dec, 18:40
spmurph...@apache.org svn commit: r1423486 [2/2] - in /incubator/ctakes/branches/ctakes-3.0.0-incubating: ctakes-core/src/main/resources/org/apache/ctakes/core/analysis_engine/ ctakes-drug-ner/ ctakes-drug-ner/desc/analysis_engine/ ctakes-drug-ner/desc/cas_consumer/ ctakes-... Tue, 18 Dec, 15:49
spmurph...@apache.org svn commit: r1423486 [1/2] - in /incubator/ctakes/branches/ctakes-3.0.0-incubating: ctakes-core/src/main/resources/org/apache/ctakes/core/analysis_engine/ ctakes-drug-ner/ ctakes-drug-ner/desc/analysis_engine/ ctakes-drug-ner/desc/cas_consumer/ ctakes-... Tue, 18 Dec, 15:49
spmurph...@apache.org svn commit: r1423487 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-smoking-status/src/main/resources/org/apache/ctakes/smokingstatus/analysis_engine/ Tue, 18 Dec, 15:50
spmurph...@apache.org svn commit: r1423509 - in /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-smoking-status/desc/collection_processing_engine: Sample_SmokingStatus_output_cda.xml Sample_SmokingStatus_output_flatfile.xml Tue, 18 Dec, 16:16
spmurph...@apache.org svn commit: r1423512 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-smoking-status/launch/UIMA CPE GUI (SmokingStatus).launch Tue, 18 Dec, 16:16
spmurph...@apache.org svn commit: r1423515 - in /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-clinical-pipeline/src/main/resources: ./ org/ org/apache/ org/apache/ctakes/ org/apache/ctakes/necontexts/ org/apache/ctakes/necontexts/desc/ Tue, 18 Dec, 16:21
spmurph...@apache.org svn commit: r1423517 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-clinical-pipeline/src/main/resources/ Tue, 18 Dec, 16:22
spmurph...@apache.org svn commit: r1423522 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-pad-term-spotter/launch/UIMA CAS Visual Debugger (Drug NER).launch Tue, 18 Dec, 16:27
spmurph...@apache.org svn commit: r1423938 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Wed, 19 Dec, 16:51
spmurph...@apache.org svn commit: r1423947 - /incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Wed, 19 Dec, 16:55
spmurph...@apache.org svn commit: r1423950 - /incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Wed, 19 Dec, 16:59
spmurph...@apache.org svn commit: r1423952 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Wed, 19 Dec, 17:02
spmurph...@apache.org svn commit: r1424028 - /incubator/ctakes/branches/ctakes-3.0.0-incubating/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Wed, 19 Dec, 18:56
spmurph...@apache.org svn commit: r1424030 - /incubator/ctakes/trunk/ctakes-drug-ner/desc/analysis_engine/DictionaryLookupAnnotatorUMLS.xml Wed, 19 Dec, 18:58
stevenbeth...@apache.org svn commit: r1416608 - /incubator/ctakes/trunk/ctakes-assertion/.settings/org.eclipse.core.resources.prefs Mon, 03 Dec, 18:13
stevenbeth...@apache.org svn commit: r1416609 - /incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/pipelines/TreeFeatureConsumer.java Mon, 03 Dec, 18:14
stevenbeth...@apache.org svn commit: r1420749 - /incubator/ctakes/trunk/ctakes-relation-extractor/src/main/java/org/apache/ctakes/relationextractor/eval/RelationExtractorEvaluation.java Wed, 12 Dec, 15:15
stevenbeth...@apache.org svn commit: r1424153 - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/EventAnnotator.java ae/feature/SRLExtractor.java ae/feature/selection/Chi2NeighborFSExtractor.java eval/Evaluation_ImplBase.java Wed, 19 Dec, 21:46
stevenbeth...@apache.org svn commit: r1424157 [1/3] - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/ ae/feature/ ae/feature/selection/ eval/ Wed, 19 Dec, 21:49
stevenbeth...@apache.org svn commit: r1424157 [3/3] - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/ ae/feature/ ae/feature/selection/ eval/ Wed, 19 Dec, 21:49
stevenbeth...@apache.org svn commit: r1424157 [2/3] - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/ ae/feature/ ae/feature/selection/ eval/ Wed, 19 Dec, 21:49
stevenbeth...@apache.org svn commit: r1424163 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/Evaluation_ImplBase.java Wed, 19 Dec, 22:00
stevenbeth...@apache.org svn commit: r1424215 - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/ ae/feature/ eval/ Wed, 19 Dec, 23:14
stevenbeth...@apache.org svn commit: r1424218 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/THYMEKnowtatorXMLReader.java Wed, 19 Dec, 23:17
stevenbeth...@apache.org svn commit: r1424219 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfAnnotationSpans_ImplBase.java Wed, 19 Dec, 23:17
stevenbeth...@apache.org svn commit: r1424221 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/ Wed, 19 Dec, 23:30
stevenbeth...@apache.org svn commit: r1424631 - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal: ae/ ae/feature/selection/ eval/ Thu, 20 Dec, 18:46
stevenbeth...@apache.org svn commit: r1424632 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/EventAnnotator.java Thu, 20 Dec, 18:48
stevenbeth...@apache.org svn commit: r1424636 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/feature/selection/MutualInformationFeatureSelection.java Thu, 20 Dec, 18:58
stevenbeth...@apache.org svn commit: r1424650 - /incubator/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/ae/SHARPKnowtatorXMLReader.java Thu, 20 Dec, 19:40
stevenbeth...@apache.org svn commit: r1424651 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/THYMEKnowtatorXMLReader.java Thu, 20 Dec, 19:41
stevenbeth...@apache.org svn commit: r1424686 - /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae/feature/selection/Chi2FeatureSelection.java Thu, 20 Dec, 20:37
stevenbeth...@apache.org svn commit: r1424725 - in /incubator/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/ae: EventAnnotator.java feature/SurfaceFormFeatureExtractor.java Thu, 20 Dec, 21:53
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