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From seanfi...@apache.org
Subject svn commit: r1818193 - /ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/
Date Thu, 14 Dec 2017 19:22:20 GMT
Author: seanfinan
Date: Thu Dec 14 19:22:19 2017
New Revision: 1818193

URL: http://svn.apache.org/viewvc?rev=1818193&view=rev
Log:
Adding piper files for -common- pipelines

Added:
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultAdvancedPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultCorefPipeline.piper
      - copied, changed from r1816385, ctakes/trunk/ctakes-clinical-pipeline-res/src/main/resources/org/apache/ctakes/clinical/pipeline/DefaultFastPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultTemporalCorefPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedAdvancedPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedCorefPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedTemporalCorefPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultAdvancedPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultCorefPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultTemporalCorefPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedAdvancedPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedCorefPipeline.piper
    ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedTemporalCorefPipeline.piper

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultAdvancedPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultAdvancedPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultAdvancedPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultAdvancedPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,9 @@
+// Default Clinical Pipeline with degree-of and location-of relations
+// with events, times, event-event and event-time relations plus event-document creation
time relations
+// with coreference resolution
+
+// Default Relation and Temporal pipeline
+load DefaultRelationTemporalPipeline
+
+// Coreference resolution
+load CorefSubPipe

Copied: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultCorefPipeline.piper
(from r1816385, ctakes/trunk/ctakes-clinical-pipeline-res/src/main/resources/org/apache/ctakes/clinical/pipeline/DefaultFastPipeline.piper)
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultCorefPipeline.piper?p2=ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultCorefPipeline.piper&p1=ctakes/trunk/ctakes-clinical-pipeline-res/src/main/resources/org/apache/ctakes/clinical/pipeline/DefaultFastPipeline.piper&r1=1816385&r2=1818193&rev=1818193&view=diff
==============================================================================
--- ctakes/trunk/ctakes-clinical-pipeline-res/src/main/resources/org/apache/ctakes/clinical/pipeline/DefaultFastPipeline.piper
(original)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -1,17 +1,7 @@
-// Commands and parameters to create a default plaintext document processing pipeline with
UMLS lookup
+// Default Clinical Pipeline with  coreference resolution
 
-// Load a simple token processing pipeline from another pipeline file
-load DefaultTokenizerPipeline
+// Default Clinical Pipeline
+load DefaultFastPipeline
 
-// Add non-core annotators
-add ContextDependentTokenizerAnnotator
-addDescription POSTagger
-
-// Add Chunkers
-load ChunkerSubPipe
-
-// Default fast dictionary lookup
-load DictionarySubPipe
-
-// Add Cleartk Entity Attribute annotators
-load AttributeCleartkSubPipe
+// Coreference resolution
+load CorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultTemporalCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultTemporalCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultTemporalCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/DefaultTemporalCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,8 @@
+// Default Clinical Pipeline with events, times, event-event and event-time relations plus
event-document creation time relations
+// and coreferences
+
+// Default Temporal pipeline
+load DefaultTemporalPipeline
+
+// Coreference resolution
+load CorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedAdvancedPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedAdvancedPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedAdvancedPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedAdvancedPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,9 @@
+// Clinical Pipeline with sectionization, paragraph and list detection and degree-of and
location-of relations
+// with events, times, event-event and event-time relations plus event-document creation
time relations
+// with coreference resolution
+
+// Sectioned Relation and Temporal pipeline
+load SectionedRelationTemporalPipeline
+
+// Coreference resolution
+load CorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,7 @@
+// Clinical Pipeline with sectionization, paragraph and list detection and coreference resolution
+
+// Default Clinical Pipeline with sectionization, paragraph and list detection
+load SectionedFastPipeline
+
+// Coreference resolution
+load CorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedTemporalCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedTemporalCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedTemporalCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/SectionedTemporalCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,8 @@
+// Clinical Pipeline with sectionization, paragraph and list detection with
+// events, times, event-event and event-time relations plus event-document creation time
relations
+
+// Clinical Pipeline with sectionization, paragraph and list detection and temporal
+load SectionedTemporalPipeline
+
+// Coreference resolution
+load CorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultAdvancedPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultAdvancedPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultAdvancedPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultAdvancedPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,9 @@
+// Thread Safe Default Clinical Pipeline with degree-of and location-of relations
+// with events, times, event-event and event-time relations plus event-document creation
time relations
+// with coreference resolution
+
+// Default Relation and Temporal pipeline
+load TsDefaultRelationTemporalPipeline
+
+// Coreference resolution
+load TsCorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,7 @@
+// Thread Safe Default Clinical Pipeline with  coreference resolution
+
+// Default Clinical Pipeline
+load TsDefaultFastPipeline
+
+// Coreference resolution
+load TsCorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultTemporalCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultTemporalCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultTemporalCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsDefaultTemporalCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,8 @@
+// Thread Safe Default Clinical Pipeline with events, times, event-event and event-time relations
plus event-document creation time relations
+// and coreferences
+
+// Default Temporal pipeline
+load TsDefaultTemporalPipeline
+
+// Coreference resolution
+load TsCorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedAdvancedPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedAdvancedPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedAdvancedPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedAdvancedPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,9 @@
+// Thread Safe Clinical Pipeline with sectionization, paragraph and list detection and degree-of
and location-of relations
+// with events, times, event-event and event-time relations plus event-document creation
time relations
+// with coreference resolution
+
+// Sectioned Relation and Temporal pipeline
+load TsSectionedRelationTemporalPipeline
+
+// Coreference resolution
+load TsCorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,7 @@
+// Thread Safe Clinical Pipeline with sectionization, paragraph and list detection and coreference
resolution
+
+// Default Clinical Pipeline with sectionization, paragraph and list detection
+load TsSectionedFastPipeline
+
+// Coreference resolution
+load TsCorefSubPipe

Added: ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedTemporalCorefPipeline.piper
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedTemporalCorefPipeline.piper?rev=1818193&view=auto
==============================================================================
--- ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedTemporalCorefPipeline.piper
(added)
+++ ctakes/trunk/ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/pipeline/TsSectionedTemporalCorefPipeline.piper
Thu Dec 14 19:22:19 2017
@@ -0,0 +1,8 @@
+// Thread Safe Clinical Pipeline with sectionization, paragraph and list detection with
+// events, times, event-event and event-time relations plus event-document creation time
relations
+
+// Clinical Pipeline with sectionization, paragraph and list detection and temporal
+load TsSectionedTemporalPipeline
+
+// Coreference resolution
+load TsCorefSubPipe



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