ctakes-dev mailing list archives: February 2013

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Masanz, James J. versions of clear* jars that are not in maven central Fri, 01 Feb, 00:31
Steven Bethard   Re: versions of clear* jars that are not in maven central Fri, 01 Feb, 00:41
RE: [DISCUSS] no binary release of cTAKES here at Apache? FW: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release
Chen, Pei   RE: [DISCUSS] no binary release of cTAKES here at Apache? FW: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release Fri, 01 Feb, 20:44
Halgrim, Scott install cTAKES, Maven, proxy Sat, 02 Feb, 01:38
Chen, Pei   RE: install cTAKES, Maven, proxy Mon, 04 Feb, 23:32
Halgrim, Scott     RE: install cTAKES, Maven, proxy Wed, 06 Feb, 20:49
Halgrim, Scott     RE: install cTAKES, Maven, proxy Wed, 06 Feb, 23:34
Shady Hussein Combining Drug and Concept annotations Mon, 04 Feb, 10:46
Chen, Pei   RE: Combining Drug and Concept annotations Mon, 04 Feb, 17:58
shady hussein     Re: Combining Drug and Concept annotations Mon, 04 Feb, 19:52
Masanz, James J.       RE: Combining Drug and Concept annotations Wed, 06 Feb, 02:14
Shady Hussein         Re: Combining Drug and Concept annotations Wed, 06 Feb, 10:20
Masanz, James J.           RE: Combining Drug and Concept annotations Thu, 07 Feb, 19:32
Masanz, James J.             RE: Combining Drug and Concept annotations Fri, 08 Feb, 02:42
Shady Hussein               Re: Combining Drug and Concept annotations Mon, 11 Feb, 10:21
Shady Hussein Annotations of a token Mon, 04 Feb, 12:48
Chen, Pei   RE: Annotations of a token Mon, 04 Feb, 15:29
Shady Hussein     Re: Annotations of a token Mon, 04 Feb, 15:54
Tim Miller assistance with dictionary lookup issue Mon, 04 Feb, 21:43
Masanz, James J.   RE: assistance with dictionary lookup issue Mon, 04 Feb, 22:01
Tim Miller     Re: assistance with dictionary lookup issue Mon, 04 Feb, 22:34
Finan, Sean       RE: assistance with dictionary lookup issue Tue, 05 Feb, 14:44
Masanz, James J.       RE: assistance with dictionary lookup issue Tue, 05 Feb, 14:51
Masanz, James J.     RE: assistance with dictionary lookup issue Tue, 05 Feb, 14:44
Tim Miller       Re: assistance with dictionary lookup issue Tue, 05 Feb, 15:10
Masanz, James J.       RE: assistance with dictionary lookup issue Tue, 05 Feb, 15:38
Tim Miller         Re: assistance with dictionary lookup issue Tue, 05 Feb, 16:04
Masanz, James J.           RE: assistance with dictionary lookup issue Tue, 05 Feb, 16:08
Finan, Sean             RE: assistance with dictionary lookup issue Tue, 05 Feb, 16:14
Tim Miller               Re: assistance with dictionary lookup issue Tue, 05 Feb, 17:15
Chen, Pei [VOTE] Apache cTAKES 3.0.0-incubating RC6 release Mon, 04 Feb, 23:42
Masanz, James J.   RE: [VOTE] Apache cTAKES 3.0.0-incubating RC6 release Wed, 06 Feb, 14:44
Chen, Pei     [CANCELLED][VOTE] Apache cTAKES 3.0.0-incubating RC6 release Wed, 06 Feb, 15:27
Masanz, James J.     RE: [CANCELLED][VOTE] Apache cTAKES 3.0.0-incubating RC6 release Wed, 06 Feb, 15:33
RE: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release
Chen, Pei   RE: [VOTE] Apache cTAKES 3.0.0-incubating RC5 release Mon, 04 Feb, 23:46
Masanz, James J. [DISCUSS] FW: [jira] [Created] (CTAKES-145) inconsistent handling of upper ascii Tue, 05 Feb, 20:03
Steven Bethard   Re: [DISCUSS] FW: [jira] [Created] (CTAKES-145) inconsistent handling of upper ascii Tue, 05 Feb, 20:11
Andy McMurry   Re: [DISCUSS] FW: [jira] [Created] (CTAKES-145) inconsistent handling of upper ascii Tue, 05 Feb, 20:19
Shady Hussein Running cTAKES without CVD UI Wed, 06 Feb, 12:39
Masanz, James J.   RE: Running cTAKES without CVD UI Thu, 07 Feb, 19:36
Deepal Dhariwal Re: Information Extraction using ontology + Access Aggregate Plain Text UMLS processor results - Concept Annotation Wed, 06 Feb, 16:16
Chen, Pei   RE: Information Extraction using ontology + Access Aggregate Plain Text UMLS processor results - Concept Annotation Wed, 06 Feb, 22:21
Chen, Pei [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Wed, 06 Feb, 22:11
Masanz, James J.   RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Mon, 11 Feb, 16:40
Oleg Tikhonov     Re: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Mon, 11 Feb, 19:56
Jörn Kottmann   Re: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Tue, 12 Feb, 10:56
Mattmann, Chris A (388J)   Re: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 15 Feb, 04:57
RE: CPE test with RC5
Chen, Pei   RE: CPE test with RC5 Wed, 06 Feb, 22:33
Chen, Pei   RE: CPE test with RC5 Fri, 08 Feb, 15:20
RE: cTAKES 3.0 developer guide review
Chen, Pei   RE: cTAKES 3.0 developer guide review Wed, 06 Feb, 22:39
Bleeker, Troy C.     RE: cTAKES 3.0 developer guide review Fri, 08 Feb, 18:07
Andy McMurry     Re: cTAKES 3.0 developer guide review Tue, 12 Feb, 23:38
Jörn Kottmann       Re: cTAKES 3.0 developer guide review Wed, 13 Feb, 08:16
Andy McMurry         Re: cTAKES 3.0 developer guide review Wed, 13 Feb, 08:50
Halgrim, Scott   RE: cTAKES 3.0 developer guide review Mon, 11 Feb, 17:55
Bleeker, Troy C.     RE: cTAKES 3.0 developer guide review Tue, 12 Feb, 19:38
Chen, Pei     RE: cTAKES 3.0 developer guide review Tue, 12 Feb, 21:23
Bleeker, Troy C.       RE: cTAKES 3.0 developer guide review Wed, 13 Feb, 20:30
Shady Hussein Concepts arenot detected Thu, 07 Feb, 10:33
Miller, Timothy   Re: Concepts arenot detected Thu, 07 Feb, 13:00
Savova, Guergana     RE: Concepts arenot detected Thu, 07 Feb, 15:01
Chen, Pei   Re: Concepts arenot detected Thu, 07 Feb, 14:52
Masanz, James J. [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 21:57
Chen, Pei   Re: [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 22:04
Chen, Pei   Re: [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 22:28
Masanz, James J.     RE: [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 22:46
Bleeker, Troy C.       RE: [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 22:52
Masanz, James J.         RE: [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 22:54
Chen, Pei     Re: [was RE: [VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 08 Feb, 23:11
Mattmann, Chris A (388J) ApacheCon NA 2013? Mon, 11 Feb, 04:47
Masanz, James J.   RE: ApacheCon NA 2013? Mon, 11 Feb, 15:08
Chen, Pei   RE: ApacheCon NA 2013? Mon, 11 Feb, 16:16
Shady Hussein Minor DateAnnotation bug Mon, 11 Feb, 10:33
Masanz, James J.   RE: Minor DateAnnotation bug Mon, 11 Feb, 17:29
Masanz, James J. checking out 3.0.0-incubating from SVN branch and merging resources Mon, 11 Feb, 16:48
Masanz, James J.   RE: checking out 3.0.0-incubating from SVN branch and merging resources Tue, 12 Feb, 11:35
Mattmann, Chris A (388J) FW: [GSoC Mentors] Google Summer of Code 2013 Mon, 11 Feb, 20:24
Shady Hussein O and LST types Wed, 13 Feb, 11:18
Masanz, James J.   RE: O and LST types Wed, 13 Feb, 16:31
Mattmann, Chris A (388J) FW: Fast Feather Track at ACNA13 - The incubator's chance to get involved! Thu, 14 Feb, 19:34
Steven Bethard SHARPKnowtatorXMLReader and new type system Thu, 14 Feb, 20:27
Masanz, James J.   RE: SHARPKnowtatorXMLReader and new type system Thu, 14 Feb, 22:43
Steven Bethard     Re: SHARPKnowtatorXMLReader and new type system Fri, 15 Feb, 00:19
Masanz, James J.       RE: SHARPKnowtatorXMLReader and new type system Fri, 15 Feb, 00:23
Mattmann, Chris A (388J) Mentioned Apache cTAKES (incubating) in article I wrote for the SDTimes on Apache in Science Fri, 15 Feb, 05:28
Chen, Pei [RESULT][VOTE] Apache cTAKES 3.0.0-incubating RC7 release Fri, 15 Feb, 16:02
Chen, Pei [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Fri, 15 Feb, 17:22
Mattmann, Chris A (388J)   Re: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Fri, 15 Feb, 17:31
Masanz, James J.   RE: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Fri, 15 Feb, 19:40
Bleeker, Troy C.   RE: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Fri, 15 Feb, 19:44
Masanz, James J.   RE: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Fri, 15 Feb, 22:42
Chen, Pei   Re: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Sat, 16 Feb, 00:19
Masanz, James J.     RE: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Wed, 20 Feb, 16:30
Chen, Pei     Re: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Wed, 20 Feb, 16:44
Masanz, James J.       RE: [DRAFT] [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Wed, 20 Feb, 18:04
Chen, Pei [DISCUSS] Graduate cTAKES from Incubator Fri, 15 Feb, 20:55
Andy McMurry   Re: [DISCUSS] Graduate cTAKES from Incubator Fri, 15 Feb, 21:08
Chen, Pei     RE: [DISCUSS] Graduate cTAKES from Incubator Fri, 15 Feb, 21:17
Bleeker, Troy C.     RE: [DISCUSS] Graduate cTAKES from Incubator Fri, 15 Feb, 22:17
Mattmann, Chris A (388J)   Re: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 00:51
Andy McMurry     Re: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 03:01
Chen, Pei   RE: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 01:02
Andy McMurry     Re: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 03:36
Andy McMurry       Re: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 04:11
Jörn Kottmann   Re: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 12:00
Britt Fitch     Re: [DISCUSS] Graduate cTAKES from Incubator Sun, 17 Feb, 17:25
Masanz, James J.   RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 07:06
Chen, Pei   Re: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 13:11
Jörn Kottmann     Re: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 14:19
Mattmann, Chris A (388J)       Re: [DISCUSS] Graduate cTAKES from Incubator Wed, 20 Feb, 05:04
Chen, Pei         RE: [DISCUSS] Graduate cTAKES from Incubator Fri, 22 Feb, 17:29
Mattmann, Chris A (388J)   Re: [DISCUSS] Graduate cTAKES from Incubator Fri, 22 Feb, 20:26
Bleeker, Troy C. User running CPE error Fri, 15 Feb, 23:24
Chen, Pei   RE: User running CPE error Sat, 16 Feb, 01:14
Bleeker, Troy C.     RE: User running CPE error Mon, 18 Feb, 15:17
Bleeker, Troy C.       RE: User running CPE error Mon, 18 Feb, 21:19
Masanz, James J.         RE: User running CPE error Mon, 18 Feb, 23:30
Chen, Pei cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Sat, 16 Feb, 04:16
Bleeker, Troy C.   RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Mon, 18 Feb, 16:57
Masanz, James J.     RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Mon, 18 Feb, 17:04
Masanz, James J.     RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 16:10
Bleeker, Troy C.       RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 22:11
andy mcmurry         Re: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 22:47
Chen, Pei           Re: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 23:12
andy mcmurry             Re: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Wed, 20 Feb, 01:42
Chen, Pei             RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Wed, 20 Feb, 03:29
andy mcmurry               RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Wed, 20 Feb, 03:38
Masanz, James J.                 RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Wed, 20 Feb, 16:13
Chen, Pei   Re: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 14:45
Bleeker, Troy C.     RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 15:28
Masanz, James J.       RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 15:42
Bleeker, Troy C.         RE: cTAKES 3.0.0 Feedback Was: RE: [DISCUSS] Graduate cTAKES from Incubator Tue, 19 Feb, 15:51
Deepal Dhariwal Section Tagging Clinical Notes Sat, 16 Feb, 18:57
Chen, Pei   Re: Section Tagging Clinical Notes Sat, 16 Feb, 22:23
Deepal Dhariwal     Re: Section Tagging Clinical Notes Sat, 16 Feb, 22:56
Chen, Pei       Re: Section Tagging Clinical Notes Sat, 16 Feb, 23:00
Chen, Pei         RE: Section Tagging Clinical Notes Fri, 22 Feb, 17:47
Deepal Dhariwal           Re: Section Tagging Clinical Notes Fri, 22 Feb, 17:58
Masanz, James J.             RE: Section Tagging Clinical Notes Fri, 22 Feb, 19:26
Deepal Dhariwal               Re: Section Tagging Clinical Notes Fri, 22 Feb, 19:28
Tim Miller                 Re: Section Tagging Clinical Notes Fri, 22 Feb, 20:01
RE: [jira] [Commented] (CTAKES-165) no maven profiles for running via maven other than mvn -PrunCPE and mvn -RrunCVD which are in ctakes-clinical-pipeline
Masanz, James J.   RE: [jira] [Commented] (CTAKES-165) no maven profiles for running via maven other than mvn -PrunCPE and mvn -RrunCVD which are in ctakes-clinical-pipeline Thu, 21 Feb, 05:15
Andy McMurry     Re: [jira] [Commented] (CTAKES-165) no maven profiles for running via maven other than mvn -PrunCPE and mvn -RrunCVD which are in ctakes-clinical-pipeline Thu, 21 Feb, 09:01
Chen, Pei   Re: [jira] [Commented] (CTAKES-165) no maven profiles for running via maven other than mvn -PrunCPE and mvn -RrunCVD which are in ctakes-clinical-pipeline Thu, 21 Feb, 14:00
Kim Ebert cTAKES 3.0 appears to be 10x slower than cTAKES 2.5 Thu, 21 Feb, 18:09
Chen, Pei   Re: cTAKES 3.0 appears to be 10x slower than cTAKES 2.5 Thu, 21 Feb, 19:12
Masanz, James J.     RE: cTAKES 3.0 appears to be 10x slower than cTAKES 2.5 Thu, 21 Feb, 20:01
Kim Ebert       Re: cTAKES 3.0 appears to be 10x slower than cTAKES 2.5 Thu, 21 Feb, 23:12
Kim Ebert         Re: cTAKES 3.0 appears to be 10x slower than cTAKES 2.5 Sat, 23 Feb, 00:22
Kim Ebert           Re: cTAKES 3.0 appears to be 10x slower than cTAKES 2.5 Tue, 26 Feb, 00:15
Bleeker, Troy C. compile versus package Thu, 21 Feb, 22:53
Masanz, James J.   RE: compile versus package Fri, 22 Feb, 03:40
Steven Bethard   Re: compile versus package Fri, 22 Feb, 08:37
Chen, Pei   RE: compile versus package Fri, 22 Feb, 14:39
Andy McMurry     Re: compile versus package Fri, 22 Feb, 15:13
Chen, Pei       RE: compile versus package Fri, 22 Feb, 15:21
Chen, Pei Establish whether "Apache cTAKES" is a suitable name Fri, 22 Feb, 17:35
Mattmann, Chris A (388J)   Re: Establish whether "Apache cTAKES" is a suitable name Fri, 22 Feb, 20:33
Wu, Stephen T., Ph.D.   RE: Establish whether "Apache cTAKES" is a suitable name Fri, 22 Feb, 21:26
Halgrim, Scott     RE: Establish whether "Apache cTAKES" is a suitable name Fri, 22 Feb, 21:30
Tim Miller     Re: Establish whether "Apache cTAKES" is a suitable name Fri, 22 Feb, 21:31
Chen, Pei     RE: Establish whether "Apache cTAKES" is a suitable name Fri, 22 Feb, 21:57
Masanz, James J.     RE: Establish whether "Apache cTAKES" is a suitable name Sat, 23 Feb, 23:02
Chen, Pei     RE: Establish whether "Apache cTAKES" is a suitable name Thu, 28 Feb, 01:43
Chen, Pei RE: Assertion/Negation Was: Section Tagging Clinical Notes Fri, 22 Feb, 18:03
Deepal Dhariwal   Re: Assertion/Negation Was: Section Tagging Clinical Notes Fri, 22 Feb, 18:10
RE: [jira] [Created] (CTAKES-170) relation extractor has dependency on clinical pipeilne
Masanz, James J.   RE: [jira] [Created] (CTAKES-170) relation extractor has dependency on clinical pipeilne Fri, 22 Feb, 20:18
Tim Miller     Re: [jira] [Created] (CTAKES-170) relation extractor has dependency on clinical pipeilne Fri, 22 Feb, 20:28
Masanz, James J.   RE: [jira] [Commented] (CTAKES-170) relation extractor has dependency on clinical pipeilne Fri, 22 Feb, 20:31
Bleeker, Troy C.     RE: [jira] [Commented] (CTAKES-170) relation extractor has dependency on clinical pipeilne Fri, 22 Feb, 21:58
Masanz, James J.   RE: [jira] [Commented] (CTAKES-170) relation extractor has dependency on clinical pipeilne Mon, 25 Feb, 19:51
Bleeker, Troy C.     RE: [jira] [Commented] (CTAKES-170) relation extractor has dependency on clinical pipeilne Wed, 27 Feb, 19:34
Pei Chen [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Fri, 22 Feb, 22:18
Mattmann, Chris A (388J)   Re: [ANNOUNCE] Apache cTAKES 3.0.0 incubating Released Sat, 23 Feb, 01:47
James Masanz CMS diff: Apache cTAKES - Getting Started Tue, 26 Feb, 08:22
Finan, Sean Build failed in Jenkins: ctakes-dictionary-lookup #190 Tue, 26 Feb, 17:09
Chen, Pei   Re: Build failed in Jenkins: ctakes-dictionary-lookup #190 Tue, 26 Feb, 17:53
Finan, Sean RE: Build failed in Jenkins: ctakes-dictionary-lookup #190 --> back to normal Tue, 26 Feb, 20:32
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