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From Dewful <dew...@gmail.com>
Subject UMLS Env variables suggestion
Date Sat, 04 Jan 2014 18:23:18 GMT
In the documentation, in the .sh files to run ctakes;

# If you plan to use the UMLS Resources, set/export env variables
# export ctakes.umlsuser=[username], ctakes.umlspw=[password]

however, simply trying to

export ctakes.umlsuser=myusername, ctakes.umlspw=mypassword

doesnt work because bash3 doesnt allow dots in the keyname and will throw
an error

bin/runctakesCVD.sh: line 42: export: `ctakes.umlsuser=username,': not a
valid identifier

some solutions

it may be helpful to show how the user can set these easily if they want to
set the env variables this way, possibly using one of the suggestions in SO.


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