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From 宾莉金 <binli...@gmail.com>
Subject Re: Corrupt HFile
Date Wed, 15 Jan 2014 05:21:14 GMT
We use cdh4.3.0‘s hadoop and ,and many table use LZO, we just found one
corrupt hfile.


2014/1/15 Ted Yu <yuzhihong@gmail.com>

> Which hadoop release are you using ?
>
> How many HFiles were corrupted ?
>
> Does lzo work properly or lzo never worked ?
>
> Thanks
>
>
> On Tue, Jan 14, 2014 at 7:36 PM, 宾莉金 <binlijin@gmail.com> wrote:
>
> > We use hbase-0.94.10 and encounter corrupt hfile.
> >
> >
> > 2014-01-11 23:24:16,547 DEBUG org.apache.hadoop.hbase.util.FSUtils:
> > Creating
> >
> >
> file=hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63
> > with permission=rwxrwxrwx
> > 2014-01-11 23:24:16,550 INFO
> > org.apache.hadoop.hbase.regionserver.StoreFile: Bloom filter type for
> >
> >
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63:
> > ROW, CompoundBloomFilterWriter
> > 2014-01-11 23:24:16,550 INFO
> > org.apache.hadoop.hbase.regionserver.StoreFile: Delete Family Bloom
> filter
> > type for
> >
> >
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63:
> > CompoundBloomFilterWriter
> >
> > 2014-01-11 23:25:29,769 INFO org.apache.hadoop.hbase.regionserver.Store:
> > Renaming compacted file at
> >
> >
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/.tmp/8a4869aafeae43ee8294bf7b65b92e63
> > to
> >
> >
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/cf/8a4869aafeae43ee8294bf7b65b92e63
> >
> > 2014-01-11 23:25:29,914 INFO org.apache.hadoop.hbase.regionserver.Store:
> > Completed major compaction of 4 file(s) in cf of
> > cbu2,/0614,1386589566547.735414b148ed70e79f4c0406963bb0c9. into
> > 8a4869aafeae43ee8294bf7b65b92e63, size=883.6 M; total size for store is
> > 884.5 M
> >
> >
> > 2014-01-15 00:15:54,412 WARN org.apache.hadoop.hbase.io.hfile.HFile: File
> >
> >
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/cf/8a4869aafeae43ee8294bf7b65b92e63
> > Stored checksum value of -1392402101 at offset 64905 does not match
> > computed checksum 242524898, total data size 64950 Checksum data range
> > offset 16384 len 16384 Header dump: magic: 4918304907327195946 blockType
> > DATA compressedBlockSizeNoHeader 64884 uncompressedBlockSizeNoHeader
> 262185
> > prevBlockOffset 71067534 checksumType CRC32 bytesPerChecksum 16384
> > onDiskDataSizeWithHeader 64901
> > 2014-01-15 00:15:54,412 WARN org.apache.hadoop.hbase.io.hfile.HFile:
> HBase
> > checksum verification failed for file
> >
> >
> hdfs://dump002002.cm6:9000/hbase-0.90/cbu2/735414b148ed70e79f4c0406963bb0c9/cf/8a4869aafeae43ee8294bf7b65b92e63
> > at offset 71128929 filesize 926536062. Retrying read with HDFS checksums
> > turned on...
> >
> > 2014-01-15 00:15:54,413 ERROR
> > org.apache.hadoop.hbase.regionserver.HRegionServer:
> > java.lang.ArrayIndexOutOfBoundsException
> >         at
> >
> >
> com.hadoop.compression.lzo.LzoDecompressor.setInput(LzoDecompressor.java:208)
> >         at
> >
> >
> org.apache.hadoop.io.compress.BlockDecompressorStream.decompress(BlockDecompressorStream.java:97)
> >         at
> >
> >
> org.apache.hadoop.io.compress.DecompressorStream.read(DecompressorStream.java:83)
> >         at java.io.BufferedInputStream.fill(BufferedInputStream.java:218)
> >         at
> java.io.BufferedInputStream.read1(BufferedInputStream.java:258)
> >         at java.io.BufferedInputStream.read(BufferedInputStream.java:317)
> >         at org.apache.hadoop.io.IOUtils.readFully(IOUtils.java:192)
> >         at
> >
> >
> org.apache.hadoop.hbase.io.hfile.HFileBlock$AbstractFSReader.decompress(HFileBlock.java:1461)
> >         at
> >
> >
> org.apache.hadoop.hbase.io.hfile.HFileBlock$FSReaderV2.readBlockDataInternal(HFileBlock.java:1891)
> >         at
> >
> >
> org.apache.hadoop.hbase.io.hfile.HFileBlock$FSReaderV2.readBlockData(HFileBlock.java:1734)
> >         at
> >
> >
> org.apache.hadoop.hbase.io.hfile.HFileReaderV2.readBlock(HFileReaderV2.java:342)
> >         at
> >
> >
> org.apache.hadoop.hbase.io.hfile.HFileReaderV2$AbstractScannerV2.readNextDataBlock(HFileReaderV2.java:597)
> >         at
> >
> >
> org.apache.hadoop.hbase.io.hfile.HFileReaderV2$ScannerV2.next(HFileReaderV2.java:695)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.StoreFileScanner.reseekAtOrAfter(StoreFileScanner.java:248)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.StoreFileScanner.reseek(StoreFileScanner.java:161)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.NonLazyKeyValueScanner.doRealSeek(NonLazyKeyValueScanner.java:54)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.KeyValueHeap.generalizedSeek(KeyValueHeap.java:321)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.KeyValueHeap.reseek(KeyValueHeap.java:265)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.StoreScanner.reseek(StoreScanner.java:545)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.StoreScanner.next(StoreScanner.java:411)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.KeyValueHeap.next(KeyValueHeap.java:143)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.populateResult(HRegion.java:3973)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.nextInternal(HRegion.java:4045)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.nextRaw(HRegion.java:3916)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.next(HRegion.java:3897)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegion$RegionScannerImpl.next(HRegion.java:3940)
> >         at
> > org.apache.hadoop.hbase.regionserver.HRegion.get(HRegion.java:4867)
> >         at
> > org.apache.hadoop.hbase.regionserver.HRegion.get(HRegion.java:4840)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegionServer.get(HRegionServer.java:2253)
> >         at
> >
> >
> org.apache.hadoop.hbase.regionserver.HRegionServer.multi(HRegionServer.java:3828)
> >         at sun.reflect.GeneratedMethodAccessor38.invoke(Unknown Source)
> >         at
> >
> >
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
> >         at java.lang.reflect.Method.invoke(Method.java:597)
> >         at
> >
> >
> org.apache.hadoop.hbase.ipc.WritableRpcEngine$Server.call(WritableRpcEngine.java:320)
> >         at
> >
> org.apache.hadoop.hbase.ipc.HBaseServer$Handler.run(HBaseServer.java:1426)
> >
> > --
> > *Best Regards,*
> >  lijin bin
> >
>



-- 
*Best Regards,*
 lijin bin

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