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From Kamil Żyta <kamil.z...@pwr.edu.pl>
Subject Re: ElastiSearch missing doc
Date Tue, 16 Dec 2014 14:55:40 GMT
err, only a few jobs causes a problem (the rest probably does not have archives).
I don't know which files you ask.

K


On Tue, Dec 16, 2014 at 03:15:16PM +0100, Kamil Żyta wrote:
> Ok, I rebuilt mcf and the problem still was so I restart all jobs and no problem.
> Thx Karl for your time.
> 
> K
> 
> On Tue, Dec 16, 2014 at 07:28:34AM -0500, Karl Wright wrote:
> > The commons-compress code just makes a simple reference to the Coder class,
> > with no reflection or anything suspicious going on.
> > 
> > If you can send me the binary file that causes this issue, I can verify
> > whether it happens here or not.  (If this seems to happen for you on ALL
> > files, then I can already assure you that it does not happen here, and
> > you've got something very special happening in your environment.)  If this
> > is not reproducible here then you probably have a corrupt commons-compress
> > jar and need to download it again.  If it *is* reproducible, then probably
> > we will need to create an Oracle Java bug ticket.
> > 
> > Karl
> > 
> > 
> > 
> > On Tue, Dec 16, 2014 at 7:17 AM, Karl Wright <daddywri@gmail.com> wrote:
> > >
> > > Ok, then I don't understand it.  It may be a bug in commons-compress, or
> > > maybe even a bad jar.  I'll have a look at their code and see if I can
> > > figure out why that class won't load.
> > >
> > > Karl
> > >
> > >
> > > On Tue, Dec 16, 2014 at 7:06 AM, Kamil Żyta <kamil.zyta@pwr.edu.pl>
wrote:
> > >>
> > >> I use multiprocess-zk-example, external pgsql db and splited war.
> > >>
> > >> K
> > >>
> > >> On Tue, Dec 16, 2014 at 07:02:47AM -0500, Karl Wright wrote:
> > >> > Hi Kamil,
> > >> >
> > >> > Which example are you using?  is this with the combined war, or is
it
> > >> one
> > >> > of the multiprocess examples, or is it the single-process quick start?
> > >> >
> > >> > I really don't have any idea why a class that IS found in a particular
> > >> jar
> > >> > cannot in turn find another class in the same jar, so I'll need as
many
> > >> > details as possible.
> > >> >
> > >> > Karl
> > >> >
> > >> >
> > >> > On Tue, Dec 16, 2014 at 6:54 AM, Kamil Żyta <kamil.zyta@pwr.edu.pl>
> > >> wrote:
> > >> > >
> > >> > > > find . -iname 'commons-compress*'
> > >> > > ./lib/commons-compress-1.8.1.jar
> > >> > > ./dist/lib/commons-compress-1.8.1.jar
> > >> > > ./framework/dist/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > >
> > >> ./framework/build/webapp/crawler-ui-proprietary/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > >
> > >> ./framework/build/webapp/combined-service-proprietary/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > >
> > >> ./framework/build/webapp/authority-service/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> ./framework/build/webapp/crawler-ui/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> ./framework/build/webapp/api-service/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > >
> > >> ./framework/build/webapp/combined-service/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > >
> > >> ./framework/build/webapp/authority-service-proprietary/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > >
> > >> ./framework/build/webapp/api-service-proprietary/WEB-INF/lib/commons-compress-1.8.1.jar
> > >> > >
> > >> > > I follow
> > >> > >
> > >> https://manifoldcf.apache.org/release/trunk/en_US/how-to-build-and-deploy.html#Building+the+framework+and+the+connectors+using+Apache+Ant
> > >> > > There aren't anything about clean-core-deps. I checkout fresh
> > >> > > release-1.8-branch.
> > >> > >
> > >> > > K
> > >> > >
> > >> > > On Tue, Dec 16, 2014 at 06:38:18AM -0500, Karl Wright wrote:
> > >> > > > Hi Kamil,
> > >> > > >
> > >> > > > I've confirmed that this should not be a classloader issue.
 The
> > >> class in
> > >> > > > question is in commons-compress.jar at the root level (under
> > >> dist/lib).
> > >> > > > The only way this would not be loadable is if you had TWO
> > >> > > commons-compress
> > >> > > > jars in your lib area.  This is possible if you upgraded
to mcf 1.8
> > >> and
> > >> > > did
> > >> > > > not do a make clean-core-deps before you did a make-core-deps,
> > >> because
> > >> > > now
> > >> > > > all jars have versions attached to their names.
> > >> > > >
> > >> > > > Please confirm you do not have duplicate jars in this directory.
> > >> > > >
> > >> > > > Thanks,
> > >> > > > Karl
> > >> > > >
> > >> > > >
> > >> > > > On Tue, Dec 16, 2014 at 6:31 AM, Karl Wright <daddywri@gmail.com>
> > >> wrote:
> > >> > > > >
> > >> > > > > Hi Kamil,
> > >> > > > >
> > >> > > > > Your problem looks like a potential classloader issue.
 Let me do
> > >> some
> > >> > > > > research and get back to you.
> > >> > > > >
> > >> > > > > Karl
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > > On Tue, Dec 16, 2014 at 5:34 AM, Kamil Żyta <
> > >> kamil.zyta@pwr.edu.pl>
> > >> > > wrote:
> > >> > > > >>
> > >> > > > >> thx Karl but now I have new issue:
> > >> > > > >>
> > >> > > > >> FATAL 2014-12-16 11:12:58,496 (Worker thread '47')
- Error
> > >> tossed:
> > >> > > Could
> > >> > > > >> not initialize class
> > >> > > org.apache.commons.compress.archivers.sevenz.Coders
> > >> > > > >> java.lang.NoClassDefFoundError: Could not initialize
class
> > >> > > > >> org.apache.commons.compress.archivers.sevenz.Coders
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.commons.compress.archivers.sevenz.SevenZFile.readEncodedHeader(SevenZFile.java:279)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.commons.compress.archivers.sevenz.SevenZFile.readHeaders(SevenZFile.java:191)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.commons.compress.archivers.sevenz.SevenZFile.<init>(SevenZFile.java:95)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.commons.compress.archivers.sevenz.SevenZFile.<init>(SevenZFile.java:117)
> > >> > > > >>         at
> > >> > > > >>
> > >> org.apache.tika.parser.pkg.PackageParser.parse(PackageParser.java:130)
> > >> > > > >>         at
> > >> > > > >>
> > >> org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:244)
> > >> > > > >>         at
> > >> > > > >>
> > >> org.apache.tika.parser.CompositeParser.parse(CompositeParser.java:244)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.tika.parser.AutoDetectParser.parse(AutoDetectParser.java:121)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.agents.transformation.tika.TikaExtractor.addOrReplaceDocumentWithException(TikaExtractor.java:230)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.agents.incrementalingest.IncrementalIngester$PipelineAddEntryPoint.addOrReplaceDocumentWithException(IncrementalIngester.java:3257)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.agents.incrementalingest.IncrementalIngester$PipelineAddFanout.sendDocument(IncrementalIngester.java:3108)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.agents.incrementalingest.IncrementalIngester$PipelineObjectWithVersions.addOrReplaceDocumentWithException(IncrementalIngester.java:2739)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.agents.incrementalingest.IncrementalIngester.documentIngest(IncrementalIngester.java:792)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.crawler.system.WorkerThread$ProcessActivity.ingestDocumentWithException(WorkerThread.java:1610)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.crawler.system.WorkerThread$ProcessActivity.ingestDocumentWithException(WorkerThread.java:1558)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.crawler.connectors.sharedrive.SharedDriveConnector.processDocuments(SharedDriveConnector.java:911)
> > >> > > > >>         at
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.crawler.system.WorkerThread.run(WorkerThread.java:383)
> > >> > > > >>
> > >> > > > >> And another question: I use Solr 4.10 with Tika
1.5. MCF 1.8
> > >> have tika
> > >> > > > >> 1.6. How this affect document parsing?
> > >> > > > >>
> > >> > > > >> K
> > >> > > > >>
> > >> > > > >> On Mon, Dec 15, 2014 at 08:45:31AM -0500, Karl
Wright wrote:
> > >> > > > >> > If you changed this file, you would need to
rerun
> > >> initialize.sh in
> > >> > > > >> order to
> > >> > > > >> > register the connector.
> > >> > > > >> >
> > >> > > > >> > Karl
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> > On Mon, Dec 15, 2014 at 8:42 AM, Kamil Żyta
<
> > >> kamil.zyta@pwr.edu.pl>
> > >> > > > >> wrote:
> > >> > > > >> > >
> > >> > > > >> > > the same as connectors.xml:
> > >> > > > >> > > (...)
> > >> > > > >> > > <repositoryconnector name="Windows
shares"
> > >> > > > >> > >
> > >> > > > >>
> > >> > >
> > >> class="org.apache.manifoldcf.crawler.connectors.sharedrive.SharedDriveConnector"/>
> > >> > > > >> > > (...)
> > >> > > > >> > >
> > >> > > > >> > > K
> > >> > > > >> > >
> > >> > > > >> > > On Mon, Dec 15, 2014 at 08:39:07AM -0500,
Karl Wright wrote:
> > >> > > > >> > > > Hi Kamil,
> > >> > > > >> > > >
> > >> > > > >> > > > What does connectors-proprietary.xml
say about the jcifs
> > >> > > connector?
> > >> > > > >> > > >
> > >> > > > >> > > > Karl
> > >> > > > >> > > >
> > >> > > > >> > > >
> > >> > > > >> > > > On Mon, Dec 15, 2014 at 8:35 AM,
Kamil Żyta <
> > >> > > kamil.zyta@pwr.edu.pl>
> > >> > > > >> > > wrote:
> > >> > > > >> > > > >
> > >> > > > >> > > > > Right, thx. Another problem:
> > >> > > > >> > > > > >
> > >> > > > >> > > > >
> > >> > > > >> > >
> > >> > > > >>
> > >> > >
> > >> org.apache.manifoldcf.crawler.connectors.sharedrive.SharedDriveConnector(uninstalled)
> > >> > > > >> > > > >
> > >> > > > >> > > > > properties.xml:
> > >> > > > >> > > > > <libdir path="../connector-lib-proprietary"/>
> > >> > > > >> > > > >
> > >> > > > >> > > > > > cat ../connectors.xml
> > >> > > > >> > > > > <repositoryconnector name="Windows
shares"
> > >> > > > >> > > > >
> > >> > > > >> > >
> > >> > > > >>
> > >> > >
> > >> class="org.apache.manifoldcf.crawler.connectors.sharedrive.SharedDriveConnector"/>
> > >> > > > >> > > > >
> > >> > > > >> > > > > > ls ../connector-lib-proprietary
> > >> > > > >> > > > > jcifs.jar
> > >> > > > >> > > > >
> > >> > > > >> > > > > I think I checked/restarted
everything.
> > >> > > > >> > > > >
> > >> > > > >> > > > > K
> > >> > > > >> > > > >
> > >> > > > >> > > > > On Mon, Dec 15, 2014 at 08:00:12AM
-0500, Karl Wright
> > >> wrote:
> > >> > > > >> > > > > > You have to run ./initialize.sh
on the MCF 1.8
> > >> codebase for
> > >> > > the
> > >> > > > >> > > upgrade
> > >> > > > >> > > > > to
> > >> > > > >> > > > > > take place.
> > >> > > > >> > > > > >
> > >> > > > >> > > > > > Karl
> > >> > > > >> > > > > >
> > >> > > > >> > > > > >
> > >> > > > >> > > > > > On Mon, Dec 15, 2014 at
7:43 AM, Kamil Żyta <
> > >> > > > >> kamil.zyta@pwr.edu.pl>
> > >> > > > >> > > > > wrote:
> > >> > > > >> > > > > > >
> > >> > > > >> > > > > > > With release-1.8-branch
is the same problem.
> > >> > > > >> > > > > > >
> > >> > > > >> > > > > > > K
> > >> > > > >> > > > > > >
> > >> > > > >> > > > > > > On Mon, Dec 15, 2014
at 06:47:12AM -0500, Karl Wright
> > >> > > wrote:
> > >> > > > >> > > > > > > > Hi Kamil,
> > >> > > > >> > > > > > > >
> > >> > > > >> > > > > > > > You cannot upgrade
to trunk from 1.x.
> > >> > > > >> > > > > > > >
> > >> > > > >> > > > > > > > Try upgrading
to branches/release-1.8-branch.
> > >> > > > >> > > > > > > >
> > >> > > > >> > > > > > > > Karl
> > >> > > > >> > > > > > > >
> > >> > > > >> > > > > > > >
> > >> > > > >> > > > > > > > On Mon, Dec
15, 2014 at 3:39 AM, Kamil Żyta <
> > >> > > > >> > > kamil.zyta@pwr.edu.pl>
> > >> > > > >> > > > > > > wrote:
> > >> > > > >> > > > > > > > >
> > >> > > > >> > > > > > > > > Hi,
> > >> > > > >> > > > > > > > > after upgrading
to trunk I get 'Database
> > >> exception:
> > >> > > > >> > > SQLException
> > >> > > > >> > > > > doing
> > >> > > > >> > > > > > > > > query (42703):
ERROR: column "needpriority" does
> > >> not
> > >> > > > >> exist'.
> > >> > > > >> > > > > > > > > How can
I upgrade db schema? I tried
> > >> ./initialize.sh
> > >> > > > >> without
> > >> > > > >> > > > > success.
> > >> > > > >> > > > > > > > >
> > >> > > > >> > > > > > > > > K
> > >> > > > >> > > > > > > > >
> > >> > > > >> > > > > > > > > On Fri,
Dec 12, 2014 at 10:40:39AM -0500, Karl
> > >> Wright
> > >> > > > >> wrote:
> > >> > > > >> > > > > > > > > > Ok,
committed a fix. CONNECTORS-1121.
> > >> > > > >> > > > > > > > > >
> > >> > > > >> > > > > > > > > > Karl
> > >> > > > >> > > > > > > > > >
> > >> > > > >> > > > > > > > > >
> > >> > > > >> > > > > > > > > > On
Fri, Dec 12, 2014 at 10:32 AM, Karl Wright <
> > >> > > > >> > > > > daddywri@gmail.com>
> > >> > > > >> > > > > > > > > wrote:
> > >> > > > >> > > > > > > > > > >
> > >> > > > >> > > > > > > > > > >
Ah, thanks, this is due to changes I made
> > >> > > yesterday.
> > >> > > > >> > > > > > > > > > >
> > >> > > > >> > > > > > > > > > >
Hold on.
> > >> > > > >> > > > > > > > > > >
Karl
> > >> > > > >> > > > > > > > > > >
> > >> > > > >> > > > > > > > > > >
> > >> > > > >> > > > > > > > > > >
On Fri, Dec 12, 2014 at 10:12 AM, Kamil Żyta
> > >> <
> > >> > > > >> > > > > > > kamil.zyta@pwr.edu.pl>
> > >> > > > >> > > > > > > > > > >
wrote:
> > >> > > > >> > > > > > > > > > >>
> > >> > > > >> > > > > > > > > > >>
On Fri, Dec 12, 2014 at 09:55:41AM -0500,
> > >> Karl
> > >> > > Wright
> > >> > > > >> > > wrote:
> > >> > > > >> > > > > > > > > > >>
> I've created CONNECTORS-1120 for this
> > >> fix.  I
> > >> > > > >> should
> > >> > > > >> > > have
> > >> > > > >> > > > > > > something
> > >> > > > >> > > > > > > > > to
> > >> > > > >> > > > > > > > > > >>
try
> > >> > > > >> > > > > > > > > > >>
> shortly.
> > >> > > > >> > > > > > > > > > >>
>
> > >> > > > >> > > > > > > > > > >>
> > >> > > > >> > > > > > > > > > >>
I can't build mcf from source:
> > >> > > > >> > > > > > > > > > >>
BUILD FAILED
> > >> > > > >> > > > > > > > > > >>
/opt/mcf-trunk/build.xml:1438: Can't get
> > >> > > > >> > > > > > > > > > >>
> > >> > > > >> > > > > > > > >
> > >> > > > >> > > > > > >
> > >> > > > >> > > > >
> > >> > > > >> > >
> > >> > > > >>
> > >> > >
> > >> https://www.apache.org/dist/manifoldcf/apache-manifoldcf-elasticsearch-plugin-2.0-bin.zip
> > >> > > > >> > > > > > > > > > >>
to
> > >> > > > >> > > > > > > > > > >>
> > >> > > > >> > > > > > > > >
> > >> > > > >> > > > > > >
> > >> > > > >> > > > >
> > >> > > > >> > >
> > >> > > > >>
> > >> > >
> > >> /opt/mcf-trunk/build/download/apache-manifoldcf-elasticsearch-plugin-bin.zip
> > >> > > > >> > > > > > > > > > >>
> > >> > > > >> > > > > > > > > > >>
K
> > >> > > > >> > > > > > > > > > >>
> > >> > > > >> > > > > > > > > > >
> > >> > > > >> > > > > > > > >
> > >> > > > >> > > > > > >
> > >> > > > >> > > > >
> > >> > > > >> > >
> > >> > > > >>
> > >> > > > >
> > >> > >
> > >>
> > >

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