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From "Joseph Naegele (JIRA)" <j...@apache.org>
Subject [jira] [Created] (NUTCH-2279) LinkRank fails when using Hadoop MR output compression
Date Tue, 14 Jun 2016 19:34:09 GMT
Joseph Naegele created NUTCH-2279:
-------------------------------------

             Summary: LinkRank fails when using Hadoop MR output compression
                 Key: NUTCH-2279
                 URL: https://issues.apache.org/jira/browse/NUTCH-2279
             Project: Nutch
          Issue Type: Bug
    Affects Versions: 1.11
            Reporter: Joseph Naegele


When using MapReduce job output compression, i.e. {{mapreduce.output.fileoutputformat.compress=true}},
LinkRank can't read the results of its {{Counter}} MR job due to the additional, generated
file extension.

For example, using the default compression codec (which appears to be DEFLATE), the counter
file is written to {{crawl/webgraph/_num_nodes_/part-00000.deflate}}. Then, the LinkRank job
attempts to manually read this file to obtain the number of links using the following code:
{code}
FSDataInputStream readLinks = fs.open(new Path(numLinksPath, "part-00000"));
{code}
which fails because the file {{part-00000}} doesn't exist:
{code}
LinkAnalysis: java.io.FileNotFoundException: File crawl/webgraph/_num_nodes_/part-00000 does
not exist
        at org.apache.hadoop.fs.RawLocalFileSystem.deprecatedGetFileStatus(RawLocalFileSystem.java:606)
        at org.apache.hadoop.fs.RawLocalFileSystem.getFileLinkStatusInternal(RawLocalFileSystem.java:819)
        at org.apache.hadoop.fs.RawLocalFileSystem.getFileStatus(RawLocalFileSystem.java:596)
        at org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:421)
        at org.apache.hadoop.fs.ChecksumFileSystem$ChecksumFSInputChecker.<init>(ChecksumFileSystem.java:140)
        at org.apache.hadoop.fs.ChecksumFileSystem.open(ChecksumFileSystem.java:341)
        at org.apache.hadoop.fs.FileSystem.open(FileSystem.java:767)
        at org.apache.nutch.scoring.webgraph.LinkRank.runCounter(LinkRank.java:124)
        at org.apache.nutch.scoring.webgraph.LinkRank.analyze(LinkRank.java:633)
        at org.apache.nutch.scoring.webgraph.LinkRank.run(LinkRank.java:713)
        at org.apache.hadoop.util.ToolRunner.run(ToolRunner.java:70)
        at org.apache.nutch.scoring.webgraph.LinkRank.main(LinkRank.java:680)
{code}

To reproduce, add {{-D mapreduce.output.fileoutputformat.compress=true}} to the properties
for {{bin/nutch linkrank ...}}



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