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From "Reynold Xin (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (SPARK-12764) XML Column type is not supported
Date Tue, 12 Jan 2016 06:20:39 GMT

     [ https://issues.apache.org/jira/browse/SPARK-12764?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Reynold Xin updated SPARK-12764:
--------------------------------
    Description: 
Hi All,

I am using PostgreSQL database. I am using the following jdbc call to access a customer table
(customer_id int, event text, country text, content xml) in my database.

{code}
val dataframe1 = sqlContext.load("jdbc", Map("url" -> "jdbc:postgresql://localhost/customerlogs?user=postgres&password=postgres",
"dbtable" -> "customer"))
{code}

When i run above command in spark-shell i receive the following error.

{code}
java.sql.SQLException: Unsupported type 1111
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.org$apache$spark$sql$execution$datasources$jdbc$JDBCRDD$$getCatalystType(JDBCRDD.scala:103)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$$anonfun$1.apply(JDBCRDD.scala:140)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$$anonfun$1.apply(JDBCRDD.scala:140)
	at scala.Option.getOrElse(Option.scala:120)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.resolveTable(JDBCRDD.scala:139)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation.<init>(JDBCRelation.scala:91)
	at org.apache.spark.sql.execution.datasources.jdbc.DefaultSource.createRelation(DefaultSource.scala:60)
	at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:158)
	at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:119)
	at org.apache.spark.sql.SQLContext.load(SQLContext.scala:1153)
	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:25)
	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:30)
	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:32)
	at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:34)
	at $iwC$$iwC$$iwC$$iwC.<init>(<console>:36)
	at $iwC$$iwC$$iwC.<init>(<console>:38)
	at $iwC$$iwC.<init>(<console>:40)
	at $iwC.<init>(<console>:42)
	at <init>(<console>:44)
	at .<init>(<console>:48)
	at .<clinit>(<console>)
	at .<init>(<console>:7)
	at .<clinit>(<console>)
	at $print(<console>)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
	at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
	at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
	at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
	at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
	at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
	at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
	at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
	at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
	at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
	at org.apache.spark.repl.Main$.main(Main.scala:31)
	at org.apache.spark.repl.Main.main(Main.scala)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
	at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
	at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
{code}

  was:
Hi All,

I am using PostgreSQL database. I am using the following jdbc call to access a customer table
(customer_id int, event text, country text, content xml) in my database.

val dataframe1 = sqlContext.load("jdbc", Map("url" -> "jdbc:postgresql://localhost/customerlogs?user=postgres&password=postgres",
"dbtable" -> "customer"))

When i run above command in spark-shell i receive the following error.

java.sql.SQLException: Unsupported type 1111
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.org$apache$spark$sql$execution$datasources$jdbc$JDBCRDD$$getCatalystType(JDBCRDD.scala:103)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$$anonfun$1.apply(JDBCRDD.scala:140)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$$anonfun$1.apply(JDBCRDD.scala:140)
	at scala.Option.getOrElse(Option.scala:120)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.resolveTable(JDBCRDD.scala:139)
	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation.<init>(JDBCRelation.scala:91)
	at org.apache.spark.sql.execution.datasources.jdbc.DefaultSource.createRelation(DefaultSource.scala:60)
	at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:158)
	at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:119)
	at org.apache.spark.sql.SQLContext.load(SQLContext.scala:1153)
	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:25)
	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:30)
	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:32)
	at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:34)
	at $iwC$$iwC$$iwC$$iwC.<init>(<console>:36)
	at $iwC$$iwC$$iwC.<init>(<console>:38)
	at $iwC$$iwC.<init>(<console>:40)
	at $iwC.<init>(<console>:42)
	at <init>(<console>:44)
	at .<init>(<console>:48)
	at .<clinit>(<console>)
	at .<init>(<console>:7)
	at .<clinit>(<console>)
	at $print(<console>)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
	at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
	at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
	at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
	at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
	at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
	at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
	at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
	at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
	at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
	at org.apache.spark.repl.Main$.main(Main.scala:31)
	at org.apache.spark.repl.Main.main(Main.scala)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
	at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
	at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)


> XML Column type is not supported
> --------------------------------
>
>                 Key: SPARK-12764
>                 URL: https://issues.apache.org/jira/browse/SPARK-12764
>             Project: Spark
>          Issue Type: Bug
>          Components: Spark Shell
>    Affects Versions: 1.6.0
>         Environment: Mac Os X El Capitan
>            Reporter: Rajeshwar Gaini
>
> Hi All,
> I am using PostgreSQL database. I am using the following jdbc call to access a customer
table (customer_id int, event text, country text, content xml) in my database.
> {code}
> val dataframe1 = sqlContext.load("jdbc", Map("url" -> "jdbc:postgresql://localhost/customerlogs?user=postgres&password=postgres",
"dbtable" -> "customer"))
> {code}
> When i run above command in spark-shell i receive the following error.
> {code}
> java.sql.SQLException: Unsupported type 1111
> 	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.org$apache$spark$sql$execution$datasources$jdbc$JDBCRDD$$getCatalystType(JDBCRDD.scala:103)
> 	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$$anonfun$1.apply(JDBCRDD.scala:140)
> 	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$$anonfun$1.apply(JDBCRDD.scala:140)
> 	at scala.Option.getOrElse(Option.scala:120)
> 	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRDD$.resolveTable(JDBCRDD.scala:139)
> 	at org.apache.spark.sql.execution.datasources.jdbc.JDBCRelation.<init>(JDBCRelation.scala:91)
> 	at org.apache.spark.sql.execution.datasources.jdbc.DefaultSource.createRelation(DefaultSource.scala:60)
> 	at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:158)
> 	at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:119)
> 	at org.apache.spark.sql.SQLContext.load(SQLContext.scala:1153)
> 	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:25)
> 	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:30)
> 	at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:32)
> 	at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:34)
> 	at $iwC$$iwC$$iwC$$iwC.<init>(<console>:36)
> 	at $iwC$$iwC$$iwC.<init>(<console>:38)
> 	at $iwC$$iwC.<init>(<console>:40)
> 	at $iwC.<init>(<console>:42)
> 	at <init>(<console>:44)
> 	at .<init>(<console>:48)
> 	at .<clinit>(<console>)
> 	at .<init>(<console>:7)
> 	at .<clinit>(<console>)
> 	at $print(<console>)
> 	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> 	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> 	at java.lang.reflect.Method.invoke(Method.java:497)
> 	at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
> 	at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
> 	at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
> 	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
> 	at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
> 	at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
> 	at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
> 	at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
> 	at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
> 	at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
> 	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
> 	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
> 	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
> 	at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
> 	at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
> 	at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
> 	at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
> 	at org.apache.spark.repl.Main$.main(Main.scala:31)
> 	at org.apache.spark.repl.Main.main(Main.scala)
> 	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> 	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> 	at java.lang.reflect.Method.invoke(Method.java:497)
> 	at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
> 	at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
> 	at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
> 	at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
> 	at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
> {code}



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