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From John Omernik <j...@omernik.com>
Subject Spark 1.3.1 On Mesos Issues.
Date Mon, 01 Jun 2015 19:49:18 GMT
All -

I am facing and odd issue and I am not really sure where to go for support
at this point.  I am running MapR which complicates things as it relates to
Mesos, however this HAS worked in the past with no issues so I am stumped
here.

So for starters, here is what I am trying to run. This is a simple show
tables using the Hive Context:

from pyspark import SparkContext, SparkConf
from pyspark.sql import SQLContext, Row, HiveContext
sparkhc = HiveContext(sc)
test = sparkhc.sql("show tables")
for r in test.collect():
  print r

When I run it on 1.3.1 using ./bin/pyspark --master local  This works with
no issues.

When I run it using Mesos with all the settings configured (as they had
worked in the past) I get lost tasks and when I zoom in them, the error
that is being reported is below.  Basically it's a NullPointerException on
the com.mapr.fs.ShimLoader.  What's weird to me is is I took each instance
and compared both together, the class path, everything is exactly the same.
Yet running in local mode works, and running in mesos fails.  Also of note,
when the task is scheduled to run on the same node as when I run locally,
that fails too! (Baffling).

Ok, for comparison, how I configured Mesos was to download the mapr4
package from spark.apache.org.  Using the exact same configuration file
(except for changing the executor tgz from 1.2.0 to 1.3.1) from the 1.2.0.
When I run this example with the mapr4 for 1.2.0 there is no issue in
Mesos, everything runs as intended. Using the same package for 1.3.1 then
it fails.

(Also of note, 1.2.1 gives a 404 error, 1.2.2 fails, and 1.3.0 fails as
well).

So basically When I used 1.2.0 and followed a set of steps, it worked on
Mesos and 1.3.1 fails.  Since this is a "current" version of Spark, MapR is
supports 1.2.1 only.  (Still working on that).

I guess I am at a loss right now on why this would be happening, any
pointers on where I could look or what I could tweak would be greatly
appreciated. Additionally, if there is something I could specifically draw
to the attention of MapR on this problem please let me know, I am perplexed
on the change from 1.2.0 to 1.3.1.

Thank you,

John




Full Error on 1.3.1 on Mesos:
15/05/19 09:31:26 INFO MemoryStore: MemoryStore started with capacity
1060.3 MB java.lang.NullPointerException at
com.mapr.fs.ShimLoader.getRootClassLoader(ShimLoader.java:96) at
com.mapr.fs.ShimLoader.injectNativeLoader(ShimLoader.java:232) at
com.mapr.fs.ShimLoader.load(ShimLoader.java:194) at
org.apache.hadoop.conf.CoreDefaultProperties.(CoreDefaultProperties.java:60)
at java.lang.Class.forName0(Native Method) at
java.lang.Class.forName(Class.java:274) at
org.apache.hadoop.conf.Configuration.getClassByNameOrNull(Configuration.java:1847)
at
org.apache.hadoop.conf.Configuration.getProperties(Configuration.java:2062)
at
org.apache.hadoop.conf.Configuration.loadResource(Configuration.java:2272)
at
org.apache.hadoop.conf.Configuration.loadResources(Configuration.java:2224)
at org.apache.hadoop.conf.Configuration.getProps(Configuration.java:2141)
at org.apache.hadoop.conf.Configuration.set(Configuration.java:992) at
org.apache.hadoop.conf.Configuration.set(Configuration.java:966) at
org.apache.spark.deploy.SparkHadoopUtil.newConfiguration(SparkHadoopUtil.scala:98)
at org.apache.spark.deploy.SparkHadoopUtil.(SparkHadoopUtil.scala:43) at
org.apache.spark.deploy.SparkHadoopUtil$.(SparkHadoopUtil.scala:220) at
org.apache.spark.deploy.SparkHadoopUtil$.(SparkHadoopUtil.scala) at
org.apache.spark.util.Utils$.getSparkOrYarnConfig(Utils.scala:1959) at
org.apache.spark.storage.BlockManager.(BlockManager.scala:104) at
org.apache.spark.storage.BlockManager.(BlockManager.scala:179) at
org.apache.spark.SparkEnv$.create(SparkEnv.scala:310) at
org.apache.spark.SparkEnv$.createExecutorEnv(SparkEnv.scala:186) at
org.apache.spark.executor.MesosExecutorBackend.registered(MesosExecutorBackend.scala:70)
java.lang.RuntimeException: Failure loading MapRClient. at
com.mapr.fs.ShimLoader.injectNativeLoader(ShimLoader.java:283) at
com.mapr.fs.ShimLoader.load(ShimLoader.java:194) at
org.apache.hadoop.conf.CoreDefaultProperties.(CoreDefaultProperties.java:60)
at java.lang.Class.forName0(Native Method) at
java.lang.Class.forName(Class.java:274) at
org.apache.hadoop.conf.Configuration.getClassByNameOrNull(Configuration.java:1847)
at
org.apache.hadoop.conf.Configuration.getProperties(Configuration.java:2062)
at
org.apache.hadoop.conf.Configuration.loadResource(Configuration.java:2272)
at
org.apache.hadoop.conf.Configuration.loadResources(Configuration.java:2224)
at org.apache.hadoop.conf.Configuration.getProps(Configuration.java:2141)
at org.apache.hadoop.conf.Configuration.set(Configuration.java:992) at
org.apache.hadoop.conf.Configuration.set(Configuration.java:966) at
org.apache.spark.deploy.SparkHadoopUtil.newConfiguration(SparkHadoopUtil.scala:98)
at org.apache.spark.deploy.SparkHadoopUtil.(SparkHadoopUtil.scala:43) at
org.apache.spark.deploy.SparkHadoopUtil$.(SparkHadoopUtil.scala:220) at
org.apache.spark.deploy.SparkHadoopUtil$.(SparkHadoopUtil.scala) at
org.apache.spark.util.Utils$.getSparkOrYarnConfig(Utils.scala:1959) at
org.apache.spark.storage.BlockManager.(BlockManager.scala:104) at
org.apache.spark.storage.BlockManager.(BlockManager.scala:179) at
org.apache.spark.SparkEnv$.create(SparkEnv.scala:310) at
org.apache.spark.SparkEnv$.createExecutorEnv(SparkEnv.scala:186) at
org.apache.spark.executor.MesosExecutorBackend.registered(MesosExecutorBackend.scala:70)

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